RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 ATRQ13535 2644 aa11.57□□□□□ -0.56
SNED1-208ENST00000466618 IGHV7-4-1A0A0J9YVY3 117 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 CLPSL1A2RUU4 121 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 PROK1P58294 105 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 KRTAP24-1Q3LI83 254 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 C10orf99Q6UWK7 81 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 SMIM2Q9BVW6 85 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 KLK15Q9H2R5 256 aa11.56□□□□□ -0.56
SNED1-208ENST00000466618 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
SNED1-208ENST00000466618 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
SNED1-208ENST00000466618 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
SNED1-208ENST00000466618 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
SNED1-208ENST00000466618 TMEM89A2RUT3 159 aa11.55□□□□□ -0.56
SNED1-208ENST00000466618 RPL32P62910 135 aaKnown RBP11.55□□□□□ -0.56
SNED1-208ENST00000466618 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
SNED1-208ENST00000466618 GAGE12JA6NER3 117 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 H3BUA1 57 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE7O76087 117 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 CFC1BP0CG36 223 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 CFC1P0CG37 223 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE12FP0CL80 117 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE12GP0CL81 117 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE12IP0CL82 117 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 PSMB8P28062 276 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE4Q13068 117 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 RNF152Q8N8N0 203 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 KLHL30-AS1Q8NEE0 82 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE2BQ13066 116 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE2EQ4V326 116 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 SMIM20Q8N5G0 67 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 GAGE2DQ9UEU5 116 aa11.54□□□□□ -0.56
SNED1-208ENST00000466618 A0A0J9YY99 117 aa11.53□□□□□ -0.56
SNED1-208ENST00000466618 M0QXV9 152 aa11.52□□□□□ -0.56
SNED1-208ENST00000466618 ASIPP42127 132 aa11.52□□□□□ -0.56
SNED1-208ENST00000466618 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.56
SNED1-208ENST00000466618 C10orf126Q8N4M7 172 aa11.52□□□□□ -0.56
SNED1-208ENST00000466618 SLC25A20O43772 301 aa11.52□□□□□ -0.57
SNED1-208ENST00000466618 ELANEP08246 267 aa11.52□□□□□ -0.57
SNED1-208ENST00000466618 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
SNED1-208ENST00000466618 TRAV8-2A0A0B4J237 113 aa11.51□□□□□ -0.57
SNED1-208ENST00000466618 SNCGO76070 127 aa11.51□□□□□ -0.57
SNED1-208ENST00000466618 IGHV3-30P01768 117 aa11.51□□□□□ -0.57
SNED1-208ENST00000466618 IGHV3-30-5P0DP03 117 aa11.51□□□□□ -0.57
SNED1-208ENST00000466618 MFAP4P55083 255 aa11.51□□□□□ -0.57
SNED1-208ENST00000466618 IFITM1P13164 125 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 KRTAP10-3P60369 221 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 Q6Q795 121 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 SCGB1C2P0DMR2 95 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 PF4V1P10720 104 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 C2orf66Q6UXQ4 117 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 Q6ZQT7 251 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
SNED1-208ENST00000466618 TENM1Q9UKZ4 2725 aa11.49□□□□□ -0.57
SNED1-208ENST00000466618 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
SNED1-208ENST00000466618 C9JAW5 83 aa11.49□□□□□ -0.57
SNED1-208ENST00000466618 CRYGDP07320 174 aa11.49□□□□□ -0.57
SNED1-208ENST00000466618 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
SNED1-208ENST00000466618 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
SNED1-208ENST00000466618 RBAKDNA6NC62 111 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 SUMO2P61956 95 aaKnown RBP11.48□□□□□ -0.57
SNED1-208ENST00000466618 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 SPANXN1Q5VSR9 72 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 TRPT1Q86TN4 253 aaKnown RBP11.48□□□□□ -0.57
SNED1-208ENST00000466618 RAX2Q96IS3 184 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 IGLV4-69A0A075B6H9 119 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
SNED1-208ENST00000466618 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 AGPAT4-IT1Q9H0P7 198 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 PRO1854Q9UHT4 67 aa11.48□□□□□ -0.57
SNED1-208ENST00000466618 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
SNED1-208ENST00000466618 C11orf86A6NJI1 115 aa11.47□□□□□ -0.57
SNED1-208ENST00000466618 CD28P10747 220 aa11.47□□□□□ -0.57
SNED1-208ENST00000466618 FAM159AQ6UWV7 190 aa11.47□□□□□ -0.57
SNED1-208ENST00000466618 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
SNED1-208ENST00000466618 Q8N1Y9 231 aa11.47□□□□□ -0.57
SNED1-208ENST00000466618 SLC25A29Q8N8R3 303 aa11.47□□□□□ -0.57
SNED1-208ENST00000466618 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
SNED1-208ENST00000466618 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.57
SNED1-208ENST00000466618 CTSGP08311 255 aa11.45□□□□□ -0.58
SNED1-208ENST00000466618 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.45□□□□□ -0.58
SNED1-208ENST00000466618 NTN5Q8WTR8 489 aaPredicted RBP11.45□□□□□ -0.58
SNED1-208ENST00000466618 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
SNED1-208ENST00000466618 TSHBP01222 138 aa11.45□□□□□ -0.58
SNED1-208ENST00000466618 HIST2H2BDQ6DRA6 164 aa11.45□□□□□ -0.58
SNED1-208ENST00000466618 CITED2Q99967 270 aaPredicted RBP11.45□□□□□ -0.58
SNED1-208ENST00000466618 C11orf44Q8N8P7 122 aa11.44□□□□□ -0.58
SNED1-208ENST00000466618 CCDC140Q96MF4 163 aa11.44□□□□□ -0.58
SNED1-208ENST00000466618 AMELXQ99217 191 aa11.44□□□□□ -0.58
SNED1-208ENST00000466618 DUSP14O95147 198 aaKnown RBP11.44□□□□□ -0.58
SNED1-208ENST00000466618 IGHV3-33P01772 117 aa11.44□□□□□ -0.58
SNED1-208ENST00000466618 EMP1P54849 157 aa11.44□□□□□ -0.58
SNED1-208ENST00000466618 TRBV7-1A0A0A6YYK4 115 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 ADARB2-AS1A8MUL3 147 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 EEF1AKMT3Q96AZ1 226 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms