RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 RNASE4P34096 147 aaKnown RBP9.59□□□□□ -0.87
CXCR4-203ENST00000466288 GNG5P63218 68 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 FABP9Q0Z7S8 132 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 ATP5L2Q7Z4Y8 100 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 Q86TA4 180 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 TSKUQ8WUA8 353 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 ZNF479Q96JC4 524 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 TNXBP22105 4242 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 TRAV34A0A0B4J273 112 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 C19orf71A6NCJ1 209 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 M0R3E3 92 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 IGLV2-11P01706 119 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 WFDC2Q14508 124 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 Q6ZQT7 251 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 GOLT1AQ6ZVE7 132 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 EXOC3-AS1Q8N2X6 119 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 AGPAT4-IT1Q9H0P7 198 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
CXCR4-203ENST00000466288 Q9HAA7 133 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 NAT8BQ9UHF3 227 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 TRAPPC1Q9Y5R8 145 aa9.58□□□□□ -0.88
CXCR4-203ENST00000466288 P01737 135 aa9.57□□□□□ -0.88
CXCR4-203ENST00000466288 ORM1P02763 201 aa9.57□□□□□ -0.88
CXCR4-203ENST00000466288 CRISP2P16562 243 aa9.57□□□□□ -0.88
CXCR4-203ENST00000466288 NDUFA6P56556 154 aa9.57□□□□□ -0.88
CXCR4-203ENST00000466288 PRR9Q5T870 116 aa9.57□□□□□ -0.88
CXCR4-203ENST00000466288 LINC00477Q96M19 166 aa9.57□□□□□ -0.88
CXCR4-203ENST00000466288 PSG8Q9UQ74 426 aa9.57□□□□□ -0.88
CXCR4-203ENST00000466288 IGHV1OR15-1A0A075B7D0 117 aa9.56□□□□□ -0.88
CXCR4-203ENST00000466288 HLA-DQA1P01909 254 aa9.56□□□□□ -0.88
CXCR4-203ENST00000466288 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
CXCR4-203ENST00000466288 RPP21Q9H633 154 aaKnown RBP9.56□□□□□ -0.88
CXCR4-203ENST00000466288 GPX1P07203 203 aa9.55□□□□□ -0.88
CXCR4-203ENST00000466288 SMIM6P0DI80 62 aa9.55□□□□□ -0.88
CXCR4-203ENST00000466288 TIRAPP58753 221 aa9.55□□□□□ -0.88
CXCR4-203ENST00000466288 Q6AWC8 147 aa9.55□□□□□ -0.88
CXCR4-203ENST00000466288 RPH3ALQ9UNE2 315 aa9.55□□□□□ -0.88
CXCR4-203ENST00000466288 LOC100131303A0A0U1RQF7 123 aa9.54□□□□□ -0.88
CXCR4-203ENST00000466288 XKRY2A2RUG3 117 aa9.54□□□□□ -0.88
CXCR4-203ENST00000466288 AKR1D1P51857 326 aa9.54□□□□□ -0.88
CXCR4-203ENST00000466288 FOXA3P55318 350 aaPredicted RBP9.54□□□□□ -0.88
CXCR4-203ENST00000466288 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
CXCR4-203ENST00000466288 LINC00518Q8N0U6 118 aa9.54□□□□□ -0.88
CXCR4-203ENST00000466288 NDFIP1Q9BT67 221 aa9.54□□□□□ -0.88
CXCR4-203ENST00000466288 S100A2P29034 98 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 C9orf47Q6ZRZ4 202 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 RASL10AQ92737 203 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 A0A1B0GW15 77 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 RPS20P60866 119 aaKnown RBP9.53□□□□□ -0.88
CXCR4-203ENST00000466288 LINC01620Q4KN68 170 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 PRR27Q6MZM9 219 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 NHLRC2Q8NBF2 726 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 CHAC1Q9BUX1 264 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 LENEPQ9Y5L5 61 aa9.53□□□□□ -0.88
CXCR4-203ENST00000466288 SH2D6Q7Z4S9 175 aa9.52□□□□□ -0.89
CXCR4-203ENST00000466288 HIST3H2BBQ8N257 126 aa9.52□□□□□ -0.89
CXCR4-203ENST00000466288 NUP35Q8NFH5 326 aa9.52□□□□□ -0.89
CXCR4-203ENST00000466288 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
CXCR4-203ENST00000466288 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-203ENST00000466288 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
CXCR4-203ENST00000466288 HIGD1CA8MV81 97 aa9.51□□□□□ -0.89
CXCR4-203ENST00000466288 Q0VG73 95 aa9.51□□□□□ -0.89
CXCR4-203ENST00000466288 DNLZQ5SXM8 178 aa9.51□□□□□ -0.89
CXCR4-203ENST00000466288 TMEM136Q6ZRR5 245 aa9.51□□□□□ -0.89
CXCR4-203ENST00000466288 CIRBP-AS1Q8TBR5 109 aa9.51□□□□□ -0.89
CXCR4-203ENST00000466288 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-203ENST00000466288 IGKV2-40A0A087WW87 121 aaPredicted RBP9.5□□□□□ -0.89
CXCR4-203ENST00000466288 LECT2O14960 151 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 IGKV2D-40P01614 121 aaPredicted RBP9.5□□□□□ -0.89
CXCR4-203ENST00000466288 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 FAM162BQ5T6X4 162 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 TM2D2Q9BX73 214 aa9.5□□□□□ -0.89
CXCR4-203ENST00000466288 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 TRAV4A0A0B4J268 109 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 TRBV7-9A0A0J9YWB2 115 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 A0A1B0GXF2 115 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 HBBP68871 147 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 LAGE3Q14657 143 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 TDRG1Q3Y452 100 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 MUC21Q5SSG8 566 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 TMEM78Q5T7P6 136 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 ZC2HC1AQ96GY0 325 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 SGK494Q96LW2 274 aa9.49□□□□□ -0.89
CXCR4-203ENST00000466288 ESDP10768 282 aa9.48□□□□□ -0.89
CXCR4-203ENST00000466288 TMEM18Q96B42 140 aa9.48□□□□□ -0.89
CXCR4-203ENST00000466288 SPXQ9BT56 116 aa9.48□□□□□ -0.89
CXCR4-203ENST00000466288 FABP5P3A8MUU1 101 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 RS1O15537 224 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 APCSP02743 223 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms