RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 TRBV7-9A0A0J9YWB2 115 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 J3QLI3 93 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 DYNLRB2Q8TF09 96 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 TSHBP01222 138 aa12.1□□□□□ -0.47
SLX4-202ENST00000466154 ELANEP08246 267 aa12.1□□□□□ -0.47
SLX4-202ENST00000466154 FLNAP21333 2647 aaKnown RBP12.1□□□□□ -0.47
SLX4-202ENST00000466154 UBE2E2Q96LR5 201 aa12.1□□□□□ -0.47
SLX4-202ENST00000466154 NBPF19A0A087WUL8 3843 aa12.1□□□□□ -0.47
SLX4-202ENST00000466154 CRYGDP07320 174 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 RNASE13Q5GAN3 156 aaKnown RBP12.09□□□□□ -0.47
SLX4-202ENST00000466154 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 ITPR3Q14573 2671 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
SLX4-202ENST00000466154 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 TMEM61Q8N0U2 210 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
SLX4-202ENST00000466154 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
SLX4-202ENST00000466154 ZNF843Q8N446 348 aa12.09□□□□□ -0.47
SLX4-202ENST00000466154 APOMO95445 188 aa12.08□□□□□ -0.48
SLX4-202ENST00000466154 PMVKQ15126 192 aa12.08□□□□□ -0.48
SLX4-202ENST00000466154 UBR5O95071 2799 aaPredicted RBP12.07□□□□□ -0.48
SLX4-202ENST00000466154 NXPH4O95158 308 aa12.07□□□□□ -0.48
SLX4-202ENST00000466154 DEFB113Q30KQ7 82 aa12.07□□□□□ -0.48
SLX4-202ENST00000466154 C9orf85Q96MD7 179 aa12.07□□□□□ -0.48
SLX4-202ENST00000466154 M0QY20 66 aa12.07□□□□□ -0.48
SLX4-202ENST00000466154 H3BMG7 143 aa12.07□□□□□ -0.48
SLX4-202ENST00000466154 MORN3Q6PF18 240 aaPredicted RBP12.07□□□□□ -0.48
SLX4-202ENST00000466154 FOXI2Q6ZQN5 318 aa12.07□□□□□ -0.48
SLX4-202ENST00000466154 TM2D2Q9BX73 214 aa12.07□□□□□ -0.48
SLX4-202ENST00000466154 E9PLD3 99 aa12.06□□□□□ -0.48
SLX4-202ENST00000466154 HERVK_113P61574 105 aa12.06□□□□□ -0.48
SLX4-202ENST00000466154 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
SLX4-202ENST00000466154 DLX4Q92988 240 aaPredicted RBP12.06□□□□□ -0.48
SLX4-202ENST00000466154 IGIPA6NJ69 53 aa12.06□□□□□ -0.48
SLX4-202ENST00000466154 IGLL5B9A064 214 aa12.06□□□□□ -0.48
SLX4-202ENST00000466154 Q9UF83 564 aa12.06□□□□□ -0.48
SLX4-202ENST00000466154 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
SLX4-202ENST00000466154 LINC01619G3V211 115 aa12.05□□□□□ -0.48
SLX4-202ENST00000466154 LINC01587Q99440 93 aa12.05□□□□□ -0.48
SLX4-202ENST00000466154 IGLV4-69A0A075B6H9 119 aa12.05□□□□□ -0.48
SLX4-202ENST00000466154 LGALS9O00182 355 aa12.05□□□□□ -0.48
SLX4-202ENST00000466154 ZNRF2Q8NHG8 242 aa12.05□□□□□ -0.48
SLX4-202ENST00000466154 IGHV3-38A0A0C4DH36 116 aa12.04□□□□□ -0.48
SLX4-202ENST00000466154 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
SLX4-202ENST00000466154 MRPL16Q9NX20 251 aaKnown RBP12.04□□□□□ -0.48
SLX4-202ENST00000466154 TRGV11A0A075B6L2 103 aa12.04□□□□□ -0.48
SLX4-202ENST00000466154 LOC107984156A0A0G2JMH3 177 aa12.04□□□□□ -0.48
SLX4-202ENST00000466154 ARL17AQ8IVW1 177 aa12.04□□□□□ -0.48
SLX4-202ENST00000466154 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
SLX4-202ENST00000466154 PHLDA1Q8WV24 401 aaPredicted RBP12.04□□□□□ -0.48
SLX4-202ENST00000466154 SVIPQ8NHG7 77 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 XCL2Q9UBD3 114 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 CR1P17927 2039 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 AZU1P20160 251 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 PGPEP1Q9NXJ5 209 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 NOTCH2Q04721 2471 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 TRBV27A0A0K0K1C4 114 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 TMEM89A2RUT3 159 aa12.03□□□□□ -0.48
SLX4-202ENST00000466154 TRBV7-3A0A075B6L6 115 aa12.02□□□□□ -0.48
SLX4-202ENST00000466154 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.48
SLX4-202ENST00000466154 WFDC11Q8NEX6 87 aa12.02□□□□□ -0.48
SLX4-202ENST00000466154 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.49
SLX4-202ENST00000466154 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.49
SLX4-202ENST00000466154 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.49
SLX4-202ENST00000466154 LINC01549A6NIU2 74 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 ADARB2-AS1A8MUL3 147 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 H3BMM0 161 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 SPAG8Q99932 426 aaPredicted RBP12.01□□□□□ -0.49
SLX4-202ENST00000466154 TNFRSF18Q9Y5U5 241 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 A0A0J9YXV3 536 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 LGALS3P17931 250 aaKnown RBP12.01□□□□□ -0.49
SLX4-202ENST00000466154 VCX2Q9H322 139 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 I3L3M4 83 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 WFDC2Q14508 124 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
SLX4-202ENST00000466154 H7C2G1 150 aa12□□□□□ -0.49
SLX4-202ENST00000466154 TMEM141Q96I45 108 aa12□□□□□ -0.49
SLX4-202ENST00000466154 CD28P10747 220 aa12□□□□□ -0.49
SLX4-202ENST00000466154 SPXQ9BT56 116 aa12□□□□□ -0.49
SLX4-202ENST00000466154 TEX48A0A1B0GUV7 120 aa11.99□□□□□ -0.49
SLX4-202ENST00000466154 TAL2Q16559 108 aa11.99□□□□□ -0.49
SLX4-202ENST00000466154 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
SLX4-202ENST00000466154 TIMM17AQ99595 171 aa11.99□□□□□ -0.49
SLX4-202ENST00000466154 RAX2Q96IS3 184 aa11.99□□□□□ -0.49
SLX4-202ENST00000466154 MAP6D1Q9H9H5 199 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 J3QQQ9 107 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 RRN3P1Q2M238 152 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 Q6ZSN1 163 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
SLX4-202ENST00000466154 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
SLX4-202ENST00000466154 FSHBP01225 129 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 ETDBQ3ZM63 59 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 C20orf203Q8NBC4 194 aa11.98□□□□□ -0.49
SLX4-202ENST00000466154 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms