RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 C5orf52A6NGY3 159 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 SERF1AO75920 110 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 IFI27P40305 119 aaPredicted RBP15.37■□□□□ 0.05
ITGA4-204ENST00000465522 SUMO2P61956 95 aaKnown RBP15.37■□□□□ 0.05
ITGA4-204ENST00000465522 ST20Q9HBF5 79 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 PRSS47A8MTI9 375 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 LINC00614P0C842 121 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 P0DMU3 169 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 FAM231AP0DMU4 169 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 FAM231CP0DMU5 169 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 FHL2Q14192 279 aa15.37■□□□□ 0.05
ITGA4-204ENST00000465522 NUPR1O60356 82 aa15.35■□□□□ 0.05
ITGA4-204ENST00000465522 HOXA5P20719 270 aa15.35■□□□□ 0.05
ITGA4-204ENST00000465522 RNASEKQ6P5S7 137 aaKnown RBP15.35■□□□□ 0.05
ITGA4-204ENST00000465522 FA2HQ7L5A8 372 aa15.35■□□□□ 0.05
ITGA4-204ENST00000465522 SLC25A29Q8N8R3 303 aa15.35■□□□□ 0.05
ITGA4-204ENST00000465522 TRBV6-5A0A0K0K1A5 114 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 LINC00310P59036 64 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 URB1-AS1Q96HZ7 61 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 NXT2Q9NPJ8 142 aaKnown RBP15.34■□□□□ 0.05
ITGA4-204ENST00000465522 TNFRSF18Q9Y5U5 241 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 TRBV6-4A0A1B0GX49 114 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 K7EQD1 137 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 ATP5G1P05496 136 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 PMCHP20382 165 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 Q9UF83 564 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 HHLA3Q9XRX5 114 aa15.34■□□□□ 0.05
ITGA4-204ENST00000465522 MEGF8Q7Z7M0 2845 aa15.33■□□□□ 0.04
ITGA4-204ENST00000465522 SDHAF1A6NFY7 115 aa15.33■□□□□ 0.04
ITGA4-204ENST00000465522 C12orf74Q32Q52 190 aa15.33■□□□□ 0.04
ITGA4-204ENST00000465522 PDZD11Q5EBL8 140 aa15.33■□□□□ 0.04
ITGA4-204ENST00000465522 Q8N8P6 123 aa15.33■□□□□ 0.04
ITGA4-204ENST00000465522 CHCHD1Q96BP2 118 aaKnown RBP15.33■□□□□ 0.04
ITGA4-204ENST00000465522 DNAJC30Q96LL9 226 aa15.33■□□□□ 0.04
ITGA4-204ENST00000465522 SMIM2Q9BVW6 85 aa15.33■□□□□ 0.04
ITGA4-204ENST00000465522 POLR2KP53803 58 aaKnown RBP15.32■□□□□ 0.04
ITGA4-204ENST00000465522 NEXN-AS1Q8NBZ9 246 aa15.32■□□□□ 0.04
ITGA4-204ENST00000465522 TMEM70Q9BUB7 260 aa15.32■□□□□ 0.04
ITGA4-204ENST00000465522 AP5S1Q9NUS5 200 aa15.31■□□□□ 0.04
ITGA4-204ENST00000465522 IGLV2-18A0A075B6J9 118 aa15.31■□□□□ 0.04
ITGA4-204ENST00000465522 TRBV10-1A0A0K0K1A3 114 aa15.31■□□□□ 0.04
ITGA4-204ENST00000465522 VCYO14598 125 aa15.31■□□□□ 0.04
ITGA4-204ENST00000465522 HSBP1O75506 76 aa15.31■□□□□ 0.04
ITGA4-204ENST00000465522 ESDP10768 282 aa15.31■□□□□ 0.04
ITGA4-204ENST00000465522 C11orf45Q8TAV5 145 aa15.31■□□□□ 0.04
ITGA4-204ENST00000465522 RPL32P62910 135 aaKnown RBP15.3■□□□□ 0.04
ITGA4-204ENST00000465522 RHOHQ15669 191 aa15.3■□□□□ 0.04
ITGA4-204ENST00000465522 HIST3H2BBQ8N257 126 aa15.3■□□□□ 0.04
ITGA4-204ENST00000465522 PRADC1Q9BSG0 188 aa15.3■□□□□ 0.04
ITGA4-204ENST00000465522 PRO0255Q9UI72 69 aa15.3■□□□□ 0.04
ITGA4-204ENST00000465522 HUWE1Q7Z6Z7 4374 aaKnown RBP15.3■□□□□ 0.04
ITGA4-204ENST00000465522 S100A2P29034 98 aa15.29■□□□□ 0.04
ITGA4-204ENST00000465522 ZNRF2Q8NHG8 242 aa15.29■□□□□ 0.04
ITGA4-204ENST00000465522 COL7A1Q02388 2944 aa15.29■□□□□ 0.04
ITGA4-204ENST00000465522 TRBV7-3A0A075B6L6 115 aa15.29■□□□□ 0.04
ITGA4-204ENST00000465522 F5H768 121 aa15.29■□□□□ 0.04
ITGA4-204ENST00000465522 NHLRC4P0CG21 123 aaPredicted RBP15.29■□□□□ 0.04
ITGA4-204ENST00000465522 HTN3P15516 51 aa15.29■□□□□ 0.04
ITGA4-204ENST00000465522 RPL36AP83881 106 aaKnown RBP15.29■□□□□ 0.04
ITGA4-204ENST00000465522 NEGR1Q7Z3B1 354 aa15.29■□□□□ 0.04
ITGA4-204ENST00000465522 RPL36ALQ969Q0 106 aaKnown RBP15.29■□□□□ 0.04
ITGA4-204ENST00000465522 TRBV27A0A0K0K1C4 114 aa15.28■□□□□ 0.04
ITGA4-204ENST00000465522 CRYBA4P53673 196 aa15.28■□□□□ 0.04
ITGA4-204ENST00000465522 KIR2DL4Q99706 377 aa15.28■□□□□ 0.04
ITGA4-204ENST00000465522 TCAPO15273 167 aa15.27■□□□□ 0.04
ITGA4-204ENST00000465522 FAM19A2Q8N3H0 131 aa15.27■□□□□ 0.04
ITGA4-204ENST00000465522 LINC01546A6NGU7 62 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 NANOS2P60321 138 aaKnown RBP15.26■□□□□ 0.03
ITGA4-204ENST00000465522 DNAH9Q9NYC9 4486 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 LOC100131303A0A0U1RQF7 123 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 GAGE12JA6NER3 117 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 I3L3M4 83 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 PAX4O43316 350 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 GAGE1Q13065 139 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 GAGE4Q13068 117 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 GAGE5Q13069 117 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 LAGE3Q14657 143 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 PMCHL1Q16048 86 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 GAGE13Q4V321 117 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 Q6ZTC4 211 aa15.26■□□□□ 0.03
ITGA4-204ENST00000465522 K7EMI3 77 aa15.25■□□□□ 0.03
ITGA4-204ENST00000465522 AMTP48728 403 aa15.25■□□□□ 0.03
ITGA4-204ENST00000465522 DEFB104AQ8WTQ1 72 aa15.25■□□□□ 0.03
ITGA4-204ENST00000465522 STAB2Q8WWQ8 2551 aa15.24■□□□□ 0.03
ITGA4-204ENST00000465522 TMEM18Q96B42 140 aa15.24■□□□□ 0.03
ITGA4-204ENST00000465522 IGHV1-24A0A0C4DH33 117 aa15.23■□□□□ 0.03
ITGA4-204ENST00000465522 FCER1GP30273 86 aa15.23■□□□□ 0.03
ITGA4-204ENST00000465522 PHLDA1Q8WV24 401 aaPredicted RBP15.23■□□□□ 0.03
ITGA4-204ENST00000465522 PRKDCP78527 4128 aaKnown RBP15.23■□□□□ 0.03
ITGA4-204ENST00000465522 A0A0J9YY99 117 aa15.23■□□□□ 0.03
ITGA4-204ENST00000465522 FABP4P15090 132 aa15.23■□□□□ 0.03
ITGA4-204ENST00000465522 GYPEP15421 78 aa15.23■□□□□ 0.03
ITGA4-204ENST00000465522 ORMDL2Q53FV1 153 aa15.23■□□□□ 0.03
ITGA4-204ENST00000465522 HIST1H2BLQ99880 126 aa15.23■□□□□ 0.03
ITGA4-204ENST00000465522 TRAV26-1A0A087WT03 109 aa15.22■□□□□ 0.03
ITGA4-204ENST00000465522 IGHV3-38A0A0C4DH36 116 aa15.22■□□□□ 0.03
ITGA4-204ENST00000465522 IFITM10A6NMD0 228 aa15.22■□□□□ 0.03
ITGA4-204ENST00000465522 UBE2D3P61077 147 aa15.22■□□□□ 0.03
ITGA4-204ENST00000465522 UBE2D2P62837 147 aa15.22■□□□□ 0.03
ITGA4-204ENST00000465522 VSIG2Q96IQ7 327 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms