RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
MRPL55-224ENST00000464148 PSG8Q9UQ74 426 aa8.76□□□□□ -1.01
MRPL55-224ENST00000464148 TRAV8-1A0A0A6YYK1 113 aa8.75□□□□□ -1.01
MRPL55-224ENST00000464148 COLCA2A8K830 154 aa8.75□□□□□ -1.01
MRPL55-224ENST00000464148 RHOHQ15669 191 aa8.75□□□□□ -1.01
MRPL55-224ENST00000464148 OR10G8Q8NGN5 311 aa8.75□□□□□ -1.01
MRPL55-224ENST00000464148 BAALCQ8WXS3 180 aa8.75□□□□□ -1.01
MRPL55-224ENST00000464148 GTSF1LQ9H1H1 148 aa8.75□□□□□ -1.01
MRPL55-224ENST00000464148 LENEPQ9Y5L5 61 aa8.75□□□□□ -1.01
MRPL55-224ENST00000464148 RS1O15537 224 aa8.74□□□□□ -1.01
MRPL55-224ENST00000464148 SAPCD1Q5SSQ6 148 aa8.74□□□□□ -1.01
MRPL55-224ENST00000464148 PRNTQ86SH4 94 aa8.74□□□□□ -1.01
MRPL55-224ENST00000464148 Q8N3U1 123 aa8.74□□□□□ -1.01
MRPL55-224ENST00000464148 ATP6V0E2Q8NHE4 81 aa8.74□□□□□ -1.01
MRPL55-224ENST00000464148 CIRBP-AS1Q8TBR5 109 aa8.74□□□□□ -1.01
MRPL55-224ENST00000464148 IGHV3-73A0A0B4J1V6 119 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 TYMSP04818 313 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
MRPL55-224ENST00000464148 ELOBQ15370 118 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 ZNF876PQ49A33 203 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 Q8N976 141 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 SGK494Q96LW2 274 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 COX11Q9Y6N1 276 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 V9GYV3 84 aa8.73□□□□□ -1.01
MRPL55-224ENST00000464148 TRBV24-1A0A075B6N3 115 aa8.72□□□□□ -1.01
MRPL55-224ENST00000464148 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
MRPL55-224ENST00000464148 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
MRPL55-224ENST00000464148 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
MRPL55-224ENST00000464148 DAZ4Q86SG3 579 aaKnown RBP8.72□□□□□ -1.01
MRPL55-224ENST00000464148 KCNS1Q96KK3 526 aa8.72□□□□□ -1.01
MRPL55-224ENST00000464148 DAZ3Q9NR90 486 aaKnown RBP8.72□□□□□ -1.01
MRPL55-224ENST00000464148 TRAV9-1A0A075B6T8 112 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 CIDEAO60543 219 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 S100PP25815 95 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 CT83Q5H943 113 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.71□□□□□ -1.02
MRPL55-224ENST00000464148 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 RMI2Q96E14 147 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 NUDT11Q96G61 164 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 ZC2HC1AQ96GY0 325 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
MRPL55-224ENST00000464148 IL36BQ9NZH7 164 aa8.71□□□□□ -1.02
MRPL55-224ENST00000464148 GATCO43716 136 aaKnown RBP8.7□□□□□ -1.02
MRPL55-224ENST00000464148 RPL37AP61513 92 aaKnown RBP8.7□□□□□ -1.02
MRPL55-224ENST00000464148 KCNIP4Q6PIL6 250 aa8.7□□□□□ -1.02
MRPL55-224ENST00000464148 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
MRPL55-224ENST00000464148 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
MRPL55-224ENST00000464148 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
MRPL55-224ENST00000464148 SMIM27A0A1W2PRY6 76 aa8.69□□□□□ -1.02
MRPL55-224ENST00000464148 RAB5AP20339 215 aa8.69□□□□□ -1.02
MRPL55-224ENST00000464148 DAZAP1Q96EP5 407 aaKnown RBP8.69□□□□□ -1.02
MRPL55-224ENST00000464148 RPP21Q9H633 154 aaKnown RBP8.69□□□□□ -1.02
MRPL55-224ENST00000464148 URGCP-MRPS24S4R325 110 aa8.69□□□□□ -1.02
MRPL55-224ENST00000464148 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 P01737 135 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 CXCL1P09341 107 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 CRIP1P50238 77 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 SMUG1Q53HV7 270 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 FAM162BQ5T6X4 162 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 PRR27Q6MZM9 219 aa8.68□□□□□ -1.02
MRPL55-224ENST00000464148 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 A8MWL6 223 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 GAGE1Q13065 139 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 GAGE4Q13068 117 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 GAGE5Q13069 117 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 GAGE13Q4V321 117 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 GFRA4Q9GZZ7 299 aa8.67□□□□□ -1.02
MRPL55-224ENST00000464148 SH2D1AO60880 128 aa8.66□□□□□ -1.02
MRPL55-224ENST00000464148 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
MRPL55-224ENST00000464148 DNAJC30Q96LL9 226 aa8.66□□□□□ -1.02
MRPL55-224ENST00000464148 FABP5P3A8MUU1 101 aa8.65□□□□□ -1.02
MRPL55-224ENST00000464148 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
MRPL55-224ENST00000464148 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
MRPL55-224ENST00000464148 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
MRPL55-224ENST00000464148 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
MRPL55-224ENST00000464148 KLK12Q9UKR0 248 aa8.65□□□□□ -1.02
MRPL55-224ENST00000464148 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
MRPL55-224ENST00000464148 C9orf85Q96MD7 179 aa8.64□□□□□ -1.03
MRPL55-224ENST00000464148 NAT8BQ9UHF3 227 aa8.64□□□□□ -1.03
MRPL55-224ENST00000464148 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
MRPL55-224ENST00000464148 RPS10P46783 165 aaKnown RBP8.63□□□□□ -1.03
MRPL55-224ENST00000464148 C14orf177Q52M58 125 aa8.63□□□□□ -1.03
MRPL55-224ENST00000464148 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
MRPL55-224ENST00000464148 PTH2Q96A98 100 aa8.63□□□□□ -1.03
MRPL55-224ENST00000464148 UBE2WQ96B02 151 aa8.63□□□□□ -1.03
MRPL55-224ENST00000464148 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
MRPL55-224ENST00000464148 A0A087WX48 190 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 C1orf196B1AJZ1 125 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 COX19Q49B96 90 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 ZFP2Q6ZN57 461 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 NIT1Q86X76 327 aa8.62□□□□□ -1.03
MRPL55-224ENST00000464148 NUP35Q8NFH5 326 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms