RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 NIT2Q9NQR4 276 aa13.58□□□□□ -0.24
CCDC78-206ENST00000463539 IGHV4-28A0A0C4DH34 117 aa13.57□□□□□ -0.24
CCDC78-206ENST00000463539 IGHV3-53P01767 116 aa13.57□□□□□ -0.24
CCDC78-206ENST00000463539 RIPPLY3P57055 190 aa13.57□□□□□ -0.24
CCDC78-206ENST00000463539 Q6ZSN1 163 aa13.57□□□□□ -0.24
CCDC78-206ENST00000463539 RPL32P62910 135 aaKnown RBP13.57□□□□□ -0.24
CCDC78-206ENST00000463539 TMEM70Q9BUB7 260 aa13.57□□□□□ -0.24
CCDC78-206ENST00000463539 SDHAF1A6NFY7 115 aa13.56□□□□□ -0.24
CCDC78-206ENST00000463539 KPRPQ5T749 579 aaPredicted RBP13.56□□□□□ -0.24
CCDC78-206ENST00000463539 TCAPO15273 167 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 LEPROTL1O95214 131 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 SMIM6P0DI80 62 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 LAGE3Q14657 143 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 Q8NAQ8 132 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 A0A096LNJ9 63 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 LYRM9A8MSI8 78 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 HBDP02042 147 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 PRB2P02812 416 aaPredicted RBP13.55□□□□□ -0.24
CCDC78-206ENST00000463539 P0DMU3 169 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 FAM231AP0DMU4 169 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 FAM231CP0DMU5 169 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 DEFB130BP0DP73 79 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 DEFB130AP0DP74 79 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 POLR2KP53803 58 aaKnown RBP13.55□□□□□ -0.24
CCDC78-206ENST00000463539 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
CCDC78-206ENST00000463539 VCYO14598 125 aa13.54□□□□□ -0.24
CCDC78-206ENST00000463539 DEFB4AO15263 64 aa13.54□□□□□ -0.24
CCDC78-206ENST00000463539 CIDEAO60543 219 aa13.54□□□□□ -0.24
CCDC78-206ENST00000463539 PYY3Q5JQD4 70 aa13.54□□□□□ -0.24
CCDC78-206ENST00000463539 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
CCDC78-206ENST00000463539 NEGR1Q7Z3B1 354 aa13.54□□□□□ -0.24
CCDC78-206ENST00000463539 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
CCDC78-206ENST00000463539 K7EMI3 77 aa13.53□□□□□ -0.24
CCDC78-206ENST00000463539 KRTDAPP60985 99 aa13.53□□□□□ -0.24
CCDC78-206ENST00000463539 TRBV27A0A0K0K1C4 114 aa13.53□□□□□ -0.24
CCDC78-206ENST00000463539 ORMDL2Q53FV1 153 aa13.53□□□□□ -0.24
CCDC78-206ENST00000463539 KIR2DL4Q99706 377 aa13.53□□□□□ -0.24
CCDC78-206ENST00000463539 HSPB8Q9UJY1 196 aa13.53□□□□□ -0.24
CCDC78-206ENST00000463539 TNFRSF18Q9Y5U5 241 aa13.53□□□□□ -0.24
CCDC78-206ENST00000463539 FCER1GP30273 86 aa13.52□□□□□ -0.25
CCDC78-206ENST00000463539 C18orf15Q96N68 181 aa13.52□□□□□ -0.25
CCDC78-206ENST00000463539 JOSD1Q15040 202 aaPredicted RBP13.51□□□□□ -0.25
CCDC78-206ENST00000463539 LINC00518Q8N0U6 118 aa13.51□□□□□ -0.25
CCDC78-206ENST00000463539 RETNQ9HD89 108 aa13.51□□□□□ -0.25
CCDC78-206ENST00000463539 DKK2Q9UBU2 259 aa13.51□□□□□ -0.25
CCDC78-206ENST00000463539 NACAE9PAV3 2078 aa13.51□□□□□ -0.25
CCDC78-206ENST00000463539 K7EIL1 84 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 K7EQD1 137 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 NUDT3O95989 172 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 NEXN-AS1Q8NBZ9 246 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 DNAJC30Q96LL9 226 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 TRGV4A0A0C4DH28 118 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 C3orf79P0CE67 100 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 BTF3P20290 206 aaKnown RBP13.5□□□□□ -0.25
CCDC78-206ENST00000463539 LINC00173Q6ZV60 143 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 C12orf57Q99622 126 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 Q9UF83 564 aa13.5□□□□□ -0.25
CCDC78-206ENST00000463539 TRBV10-1A0A0K0K1A3 114 aa13.49□□□□□ -0.25
CCDC78-206ENST00000463539 I3L3M4 83 aa13.49□□□□□ -0.25
CCDC78-206ENST00000463539 SLC25A29Q8N8R3 303 aa13.49□□□□□ -0.25
CCDC78-206ENST00000463539 SCGB1D1O95968 90 aa13.48□□□□□ -0.25
CCDC78-206ENST00000463539 DEFB104AQ8WTQ1 72 aa13.48□□□□□ -0.25
CCDC78-206ENST00000463539 TRBV6-4A0A1B0GX49 114 aa13.47□□□□□ -0.25
CCDC78-206ENST00000463539 SPART-AS1P0CW21 52 aa13.47□□□□□ -0.25
CCDC78-206ENST00000463539 FHL2Q14192 279 aa13.47□□□□□ -0.25
CCDC78-206ENST00000463539 MAP1LC3CQ9BXW4 147 aa13.47□□□□□ -0.25
CCDC78-206ENST00000463539 DAD1P61803 113 aa13.46□□□□□ -0.25
CCDC78-206ENST00000463539 DEFB121Q5J5C9 76 aa13.46□□□□□ -0.25
CCDC78-206ENST00000463539 CELA1Q9UNI1 258 aa13.46□□□□□ -0.25
CCDC78-206ENST00000463539 TSHBP01222 138 aa13.46□□□□□ -0.26
CCDC78-206ENST00000463539 RPL36AP83881 106 aaKnown RBP13.46□□□□□ -0.26
CCDC78-206ENST00000463539 SBSPONQ8IVN8 264 aa13.46□□□□□ -0.26
CCDC78-206ENST00000463539 RPL36ALQ969Q0 106 aaKnown RBP13.46□□□□□ -0.26
CCDC78-206ENST00000463539 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
CCDC78-206ENST00000463539 RHOHQ15669 191 aa13.45□□□□□ -0.26
CCDC78-206ENST00000463539 ZNRF2Q8NHG8 242 aa13.45□□□□□ -0.26
CCDC78-206ENST00000463539 TEX48A0A1B0GUV7 120 aa13.44□□□□□ -0.26
CCDC78-206ENST00000463539 SYS1-DBNDD2H3BUS1 97 aa13.44□□□□□ -0.26
CCDC78-206ENST00000463539 G0S2P27469 103 aa13.44□□□□□ -0.26
CCDC78-206ENST00000463539 C2orf66Q6UXQ4 117 aa13.43□□□□□ -0.26
CCDC78-206ENST00000463539 TOMM6Q96B49 74 aa13.43□□□□□ -0.26
CCDC78-206ENST00000463539 IFI27L1Q96BM0 104 aa13.43□□□□□ -0.26
CCDC78-206ENST00000463539 H0Y8G0 127 aa13.43□□□□□ -0.26
CCDC78-206ENST00000463539 CDPF1Q6NVV7 123 aa13.43□□□□□ -0.26
CCDC78-206ENST00000463539 PRADC1Q9BSG0 188 aa13.43□□□□□ -0.26
CCDC78-206ENST00000463539 HHLA3Q9XRX5 114 aa13.43□□□□□ -0.26
CCDC78-206ENST00000463539 GAGE12JA6NER3 117 aa13.42□□□□□ -0.26
CCDC78-206ENST00000463539 GAGE1Q13065 139 aa13.42□□□□□ -0.26
CCDC78-206ENST00000463539 GAGE4Q13068 117 aa13.42□□□□□ -0.26
CCDC78-206ENST00000463539 GAGE5Q13069 117 aa13.42□□□□□ -0.26
CCDC78-206ENST00000463539 GAGE13Q4V321 117 aa13.42□□□□□ -0.26
CCDC78-206ENST00000463539 Q8N976 141 aa13.42□□□□□ -0.26
CCDC78-206ENST00000463539 PHLDA1Q8WV24 401 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-206ENST00000463539 C11orf68Q9H3H3 251 aaKnown RBP13.42□□□□□ -0.26
CCDC78-206ENST00000463539 CYSLTR1Q9Y271 337 aa13.42□□□□□ -0.26
CCDC78-206ENST00000463539 IGHV3-38A0A0C4DH36 116 aa13.41□□□□□ -0.26
CCDC78-206ENST00000463539 ATP5LO75964 103 aa13.41□□□□□ -0.26
CCDC78-206ENST00000463539 SPATA25Q9BR10 227 aa13.41□□□□□ -0.26
CCDC78-206ENST00000463539 KRTAP21-3Q3LHN1 58 aa13.41□□□□□ -0.26
CCDC78-206ENST00000463539 PET117Q6UWS5 81 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms