RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 AKAIN1P0CW23 69 aa1.51□□□□□ -2.17
HERC4-208ENST00000463478 OCIAD2Q56VL3 154 aa1.51□□□□□ -2.17
HERC4-208ENST00000463478 MIC13Q5XKP0 118 aa1.51□□□□□ -2.17
HERC4-208ENST00000463478 SPTSSAQ969W0 71 aa1.51□□□□□ -2.17
HERC4-208ENST00000463478 PDCD10Q9BUL8 212 aa1.51□□□□□ -2.17
HERC4-208ENST00000463478 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
HERC4-208ENST00000463478 CORTO00230 105 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 ZZEF1O43149 2961 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 KLF7O75840 302 aaPredicted RBP1.5□□□□□ -2.17
HERC4-208ENST00000463478 TNFP01375 233 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 ANGP03950 147 aaKnown RBP1.5□□□□□ -2.17
HERC4-208ENST00000463478 ARL14EPLP0DKL9 152 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 HIST1H1DP16402 221 aaKnown RBP1.5□□□□□ -2.17
HERC4-208ENST00000463478 CSAG1Q6PB30 78 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 PPP1R1CQ8WVI7 109 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 TMEM141Q96I45 108 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 GNG8Q9UK08 70 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 SCN3AQ9NY46 2000 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 TANC2Q9HCD6 1990 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 EIF4G3O43432 1585 aaKnown RBP1.5□□□□□ -2.17
HERC4-208ENST00000463478 CFTRP13569 1480 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 ZNF518AQ6AHZ1 1483 aa1.5□□□□□ -2.17
HERC4-208ENST00000463478 KIDINS220Q9ULH0 1771 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 COL4A1P02462 1669 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 KDM5AP29375 1690 aaKnown RBP1.49□□□□□ -2.17
HERC4-208ENST00000463478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.49□□□□□ -2.17
HERC4-208ENST00000463478 TRAV23DV6A0A075B6W5 121 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 TEX49A0A1B0GTD5 131 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 IL5P05113 134 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 PIRTP0C851 137 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 Q56UQ5 140 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 SPRNQ5BIV9 151 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 TCEAL7Q9BRU2 100 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 TMEM242Q9NWH2 141 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 SERP1Q9Y6X1 66 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 CDK5RAP2Q96SN8 1893 aa1.49□□□□□ -2.17
HERC4-208ENST00000463478 RIMS1Q86UR5 1692 aaKnown RBP1.48□□□□□ -2.17
HERC4-208ENST00000463478 MUC4Q99102 2169 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 FREM2Q5SZK8 3169 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 TRAV17A0A0B4J275 112 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 A6NIN4 97 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 F6UZH7 168 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 IFNA17P01571 189 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 SLC25A6P12236 298 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 Q6AWC8 147 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 Q6ZSA8 131 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 C4orf33Q8N1A6 199 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 ODF3Q96PU9 254 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 NDUFA12Q9UI09 145 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 IER3IP1Q9Y5U9 82 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 CLASP1Q7Z460 1538 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 ACANP16112 2415 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 CFAP43Q8NDM7 1665 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 SPTBN2O15020 2390 aa1.48□□□□□ -2.17
HERC4-208ENST00000463478 KIAA1549LQ6ZVL6 1849 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 PCDH15Q96QU1 1955 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 M0R129 80 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 SNCGO76070 127 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 IGKCP01834 107 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 CCKP06307 115 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 IL7P13232 177 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 GNG4P50150 75 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 XAF1Q6GPH4 301 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 LINC00575Q6W349 94 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 SBSPONQ8IVN8 264 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 LIMD2Q9BT23 127 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 SCN3BQ9NY72 215 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 MBD5Q9P267 1494 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 APCP25054 2843 aa1.47□□□□□ -2.17
HERC4-208ENST00000463478 PLXNA4Q9HCM2 1894 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 PTPRMP28827 1452 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 APOC4-APOC2K7ER74 178 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 APOC2P02655 101 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 CBLN1P23435 193 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 FXYD4P59646 89 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 RPL37AP61513 92 aaKnown RBP1.46□□□□□ -2.18
HERC4-208ENST00000463478 C9orf116Q5BN46 136 aaPredicted RBP1.46□□□□□ -2.18
HERC4-208ENST00000463478 RPL7L1Q6DKI1 246 aaKnown RBP1.46□□□□□ -2.18
HERC4-208ENST00000463478 SLC48A1Q6P1K1 146 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 AMELYQ99218 206 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 SEC11CQ9BY50 192 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 CENPEQ02224 2701 aa1.46□□□□□ -2.18
HERC4-208ENST00000463478 DMXL2Q8TDJ6 3036 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 ARFGEF3Q5TH69 2177 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 ZFC3H1O60293 1989 aaKnown RBP1.45□□□□□ -2.18
HERC4-208ENST00000463478 A2ML1A8K2U0 1454 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 HIVEP1P15822 2718 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 MCRIP1C9JLW8 97 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 C10orf99Q6UWK7 81 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 PPP3R2Q96LZ3 170 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 RPRMQ9NS64 109 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 DMXL1Q9Y485 3027 aa1.45□□□□□ -2.18
HERC4-208ENST00000463478 KTN1Q86UP2 1357 aaKnown RBP1.45□□□□□ -2.18
HERC4-208ENST00000463478 CEP192Q8TEP8 1941 aa1.44□□□□□ -2.18
HERC4-208ENST00000463478 INTS1Q8N201 2190 aaKnown RBP1.44□□□□□ -2.18
HERC4-208ENST00000463478 CSMD2Q7Z408 3487 aa1.44□□□□□ -2.18
HERC4-208ENST00000463478 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms