RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SMKR1H3BMG3 65 aa9.65□□□□□ -0.87
PHACTR4-203ENST00000463428 H7C1H1 209 aa9.64□□□□□ -0.87
PHACTR4-203ENST00000463428 HLA-DQA1P01909 254 aa9.64□□□□□ -0.87
PHACTR4-203ENST00000463428 RPS10P46783 165 aaKnown RBP9.64□□□□□ -0.87
PHACTR4-203ENST00000463428 CASC10Q5T4H9 136 aa9.64□□□□□ -0.87
PHACTR4-203ENST00000463428 NRACQ8N912 160 aa9.64□□□□□ -0.87
PHACTR4-203ENST00000463428 C15orf53Q8NAA6 179 aa9.64□□□□□ -0.87
PHACTR4-203ENST00000463428 NIT2Q9NQR4 276 aa9.64□□□□□ -0.87
PHACTR4-203ENST00000463428 TRBV7-3A0A075B6L6 115 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 GAGE12JA6NER3 117 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 NCR2O95944 276 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 MT-ND6P03923 174 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 GAGE1Q13065 139 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 GAGE4Q13068 117 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 GAGE5Q13069 117 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 MRPL23Q16540 153 aaKnown RBP9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 GAGE13Q4V321 117 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 ZNRF2Q8NHG8 242 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 DNAJC30Q96LL9 226 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 ICOSQ9Y6W8 199 aa9.63□□□□□ -0.87
PHACTR4-203ENST00000463428 TRBV6-5A0A0K0K1A5 114 aa9.62□□□□□ -0.87
PHACTR4-203ENST00000463428 NUDT3O95989 172 aa9.62□□□□□ -0.87
PHACTR4-203ENST00000463428 TCTAP57738 103 aa9.62□□□□□ -0.87
PHACTR4-203ENST00000463428 UBE2D3P61077 147 aa9.62□□□□□ -0.87
PHACTR4-203ENST00000463428 UBE2D2P62837 147 aa9.62□□□□□ -0.87
PHACTR4-203ENST00000463428 RPL36AP83881 106 aaKnown RBP9.62□□□□□ -0.87
PHACTR4-203ENST00000463428 RPL36ALQ969Q0 106 aaKnown RBP9.62□□□□□ -0.87
PHACTR4-203ENST00000463428 D6R8Y8 96 aa9.61□□□□□ -0.87
PHACTR4-203ENST00000463428 APCSP02743 223 aa9.61□□□□□ -0.87
PHACTR4-203ENST00000463428 PPBPP02775 128 aa9.61□□□□□ -0.87
PHACTR4-203ENST00000463428 CKS2P33552 79 aa9.61□□□□□ -0.87
PHACTR4-203ENST00000463428 MRPL18Q9H0U6 180 aaKnown RBP9.61□□□□□ -0.87
PHACTR4-203ENST00000463428 SRIP30626 198 aa9.6□□□□□ -0.87
PHACTR4-203ENST00000463428 KIAA1644Q3SXP7 199 aa9.6□□□□□ -0.87
PHACTR4-203ENST00000463428 ORMDL3Q8N138 153 aa9.6□□□□□ -0.87
PHACTR4-203ENST00000463428 TRAPPC1Q9Y5R8 145 aa9.6□□□□□ -0.87
PHACTR4-203ENST00000463428 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
PHACTR4-203ENST00000463428 PLECQ15149 4684 aaKnown RBP9.6□□□□□ -0.87
PHACTR4-203ENST00000463428 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
PHACTR4-203ENST00000463428 NPYP01303 97 aa9.59□□□□□ -0.87
PHACTR4-203ENST00000463428 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
PHACTR4-203ENST00000463428 OR10J3Q5JRS4 329 aa9.59□□□□□ -0.87
PHACTR4-203ENST00000463428 NEGR1Q7Z3B1 354 aa9.59□□□□□ -0.87
PHACTR4-203ENST00000463428 ATP6V0E2Q8NHE4 81 aa9.59□□□□□ -0.87
PHACTR4-203ENST00000463428 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
PHACTR4-203ENST00000463428 PHOX2AO14813 284 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 PPP1R17O96001 155 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 RAB5AP20339 215 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 FABP9Q0Z7S8 132 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 ESRGQ1W209 222 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 SH2D6Q7Z4S9 175 aa9.58□□□□□ -0.88
PHACTR4-203ENST00000463428 SDHAF1A6NFY7 115 aa9.57□□□□□ -0.88
PHACTR4-203ENST00000463428 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
PHACTR4-203ENST00000463428 C20orf78Q9BR46 151 aa9.57□□□□□ -0.88
PHACTR4-203ENST00000463428 ALKBH7Q9BT30 221 aaPredicted RBP9.57□□□□□ -0.88
PHACTR4-203ENST00000463428 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
PHACTR4-203ENST00000463428 ST20Q9HBF5 79 aa9.57□□□□□ -0.88
PHACTR4-203ENST00000463428 LAMTOR2Q9Y2Q5 125 aa9.57□□□□□ -0.88
PHACTR4-203ENST00000463428 IGHV3-38A0A0C4DH36 116 aa9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 TIRAPP58753 221 aa9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 SUMO2P61956 95 aaKnown RBP9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 DAZ4Q86SG3 579 aaKnown RBP9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 DAZ3Q9NR90 486 aaKnown RBP9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
PHACTR4-203ENST00000463428 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
PHACTR4-203ENST00000463428 TRGC2P03986 189 aa9.55□□□□□ -0.88
PHACTR4-203ENST00000463428 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
PHACTR4-203ENST00000463428 VCYO14598 125 aa9.54□□□□□ -0.88
PHACTR4-203ENST00000463428 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
PHACTR4-203ENST00000463428 I3L3M4 83 aa9.53□□□□□ -0.88
PHACTR4-203ENST00000463428 PMCHP20382 165 aa9.53□□□□□ -0.88
PHACTR4-203ENST00000463428 DEFB104AQ8WTQ1 72 aa9.53□□□□□ -0.88
PHACTR4-203ENST00000463428 TRBV6-8A0A0A6YYG3 113 aa9.52□□□□□ -0.89
PHACTR4-203ENST00000463428 TSHBP01222 138 aa9.52□□□□□ -0.89
PHACTR4-203ENST00000463428 CCL18P55774 89 aa9.52□□□□□ -0.89
PHACTR4-203ENST00000463428 LELP1Q5T871 98 aa9.52□□□□□ -0.89
PHACTR4-203ENST00000463428 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
PHACTR4-203ENST00000463428 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
PHACTR4-203ENST00000463428 LOC389332A0A1B0GUA5 103 aa9.51□□□□□ -0.89
PHACTR4-203ENST00000463428 TMEM97Q5BJF2 176 aa9.51□□□□□ -0.89
PHACTR4-203ENST00000463428 LGALS9CQ6DKI2 356 aa9.51□□□□□ -0.89
PHACTR4-203ENST00000463428 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
PHACTR4-203ENST00000463428 C18orf32Q8TCD1 76 aa9.51□□□□□ -0.89
PHACTR4-203ENST00000463428 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
PHACTR4-203ENST00000463428 COTL1Q14019 142 aa9.5□□□□□ -0.89
PHACTR4-203ENST00000463428 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
PHACTR4-203ENST00000463428 Q8N8P6 123 aa9.5□□□□□ -0.89
PHACTR4-203ENST00000463428 LYSTQ99698 3801 aa9.5□□□□□ -0.89
PHACTR4-203ENST00000463428 ESDP10768 282 aa9.49□□□□□ -0.89
PHACTR4-203ENST00000463428 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
PHACTR4-203ENST00000463428 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
PHACTR4-203ENST00000463428 VPS13DQ5THJ4 4388 aa9.49□□□□□ -0.89
PHACTR4-203ENST00000463428 IGHV1-24A0A0C4DH33 117 aa9.48□□□□□ -0.89
PHACTR4-203ENST00000463428 TCAPO15273 167 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms