RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 BEAN1Q3B7T3 259 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 C2orf91Q6ZV80 131 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 DPM2O94777 84 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 NDUFA11Q86Y39 141 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 PTH2Q96A98 100 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 IGKV2D-26A0A0A0MRZ7 120 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 TRAV12-1A0A0B4J245 112 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 GIG44P09565 113 aaPredicted RBP7.38□□□□□ -1.23
MSH5-211ENST00000463144 Q6ZSN1 163 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 ERASQ7Z444 233 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 BOD1L2Q8IYS8 172 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
MSH5-211ENST00000463144 TSHBP01222 138 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 P0DMU3 169 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 FAM231AP0DMU4 169 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 FAM231CP0DMU5 169 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 RPL39P62891 51 aaKnown RBP7.37□□□□□ -1.23
MSH5-211ENST00000463144 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 PIK3CD-AS1Q5SR53 167 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 COL5A1-AS1Q5SY13 56 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 Q9UF83 564 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
MSH5-211ENST00000463144 NSD1Q96L73 2696 aaPredicted RBP7.37□□□□□ -1.23
MSH5-211ENST00000463144 IGIPA6NJ69 53 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 CFAP126Q5VTH2 177 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 MRPL16Q9NX20 251 aaKnown RBP7.36□□□□□ -1.23
MSH5-211ENST00000463144 TP53TG1Q9Y2A0 90 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 IGHV3OR16-12A0A075B7B8 117 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 A8MWV9 139 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 H7C1H1 209 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 NMUP48645 174 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 RIPPLY3P57055 190 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 ZC2HC1BQ5TFG8 222 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 GTSCR1Q86UQ5 136 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 SPXQ9BT56 116 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 CYSLTR1Q9Y271 337 aa7.36□□□□□ -1.23
MSH5-211ENST00000463144 FN1P02751 2386 aaKnown RBP7.36□□□□□ -1.23
MSH5-211ENST00000463144 F8VRH5 84 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 CMC4P56277 68 aaPredicted RBP7.35□□□□□ -1.23
MSH5-211ENST00000463144 LINC00482Q8N8I6 264 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 TMEM208Q9BTX3 173 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 BVES-AS1Q5T3Y7 98 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 SPATA3Q8NHX4 192 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 CHTOPQ9Y3Y2 248 aaKnown RBP7.35□□□□□ -1.23
MSH5-211ENST00000463144 MAST4O15021 2626 aa7.35□□□□□ -1.23
MSH5-211ENST00000463144 RS1O15537 224 aa7.34□□□□□ -1.23
MSH5-211ENST00000463144 DLEU1O43261 78 aa7.34□□□□□ -1.23
MSH5-211ENST00000463144 I3L3M4 83 aa7.34□□□□□ -1.24
MSH5-211ENST00000463144 RPL35AP18077 110 aaKnown RBP7.34□□□□□ -1.24
MSH5-211ENST00000463144 PLNP26678 52 aa7.34□□□□□ -1.24
MSH5-211ENST00000463144 G0S2P27469 103 aa7.34□□□□□ -1.24
MSH5-211ENST00000463144 RNASE8Q8TDE3 154 aaKnown RBP7.34□□□□□ -1.24
MSH5-211ENST00000463144 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
MSH5-211ENST00000463144 CRLF1O75462 422 aa7.33□□□□□ -1.24
MSH5-211ENST00000463144 PF4P02776 101 aa7.33□□□□□ -1.24
MSH5-211ENST00000463144 Q6ZVH6 145 aa7.33□□□□□ -1.24
MSH5-211ENST00000463144 C2CD3Q4AC94 2353 aa7.33□□□□□ -1.24
MSH5-211ENST00000463144 RHOHQ15669 191 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 CSNK1G2-AS1Q8NCQ2 148 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 TIMM17AQ99595 171 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 LINC01549A6NIU2 74 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 SIVA1O15304 175 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 C12orf54Q6X4T0 127 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 MAPKAPK5-AS1Q8N8E1 139 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 C20orf203Q8NBC4 194 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 OPRPNQ99935 248 aaPredicted RBP7.32□□□□□ -1.24
MSH5-211ENST00000463144 VWFP04275 2813 aa7.32□□□□□ -1.24
MSH5-211ENST00000463144 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 IGHV3-53P01767 116 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 ZNF25P17030 456 aaPredicted RBP7.31□□□□□ -1.24
MSH5-211ENST00000463144 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 TENM1Q9UKZ4 2725 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 TRGV1A0A0A0MS02 117 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 PLAC8L1A1L4L8 177 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 RHODO00212 210 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 PMVKQ15126 192 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 TMEM97Q5BJF2 176 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 Q6ZTI0 123 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 TMEM263Q8WUH6 116 aaKnown RBP7.31□□□□□ -1.24
MSH5-211ENST00000463144 TNFRSF18Q9Y5U5 241 aa7.31□□□□□ -1.24
MSH5-211ENST00000463144 EMP1P54849 157 aa7.3□□□□□ -1.24
MSH5-211ENST00000463144 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
MSH5-211ENST00000463144 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.3□□□□□ -1.24
MSH5-211ENST00000463144 FAM104AQ969W3 186 aa7.3□□□□□ -1.24
MSH5-211ENST00000463144 ZNF479Q96JC4 524 aa7.3□□□□□ -1.24
MSH5-211ENST00000463144 TRAV8-6A0A0B4J262 113 aa7.29□□□□□ -1.24
MSH5-211ENST00000463144 OR4C5Q8NGB2 326 aa7.29□□□□□ -1.24
MSH5-211ENST00000463144 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
MSH5-211ENST00000463144 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms