RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 TRBV7-3A0A075B6L6 115 aa7.51□□□□□ -1.21
RTF1-202ENST00000462276 PRSS47A8MTI9 375 aa7.51□□□□□ -1.21
RTF1-202ENST00000462276 C1orf196B1AJZ1 125 aa7.51□□□□□ -1.21
RTF1-202ENST00000462276 HOXA5P20719 270 aa7.51□□□□□ -1.21
RTF1-202ENST00000462276 OR10J3Q5JRS4 329 aa7.51□□□□□ -1.21
RTF1-202ENST00000462276 Q6ZSN1 163 aa7.51□□□□□ -1.21
RTF1-202ENST00000462276 ALKBH7Q9BT30 221 aaPredicted RBP7.51□□□□□ -1.21
RTF1-202ENST00000462276 ST20Q9HBF5 79 aa7.51□□□□□ -1.21
RTF1-202ENST00000462276 TCAPO15273 167 aa7.5□□□□□ -1.21
RTF1-202ENST00000462276 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
RTF1-202ENST00000462276 HTN3P15516 51 aa7.5□□□□□ -1.21
RTF1-202ENST00000462276 SUMO2P61956 95 aaKnown RBP7.5□□□□□ -1.21
RTF1-202ENST00000462276 MRPL23Q16540 153 aaKnown RBP7.5□□□□□ -1.21
RTF1-202ENST00000462276 KIAA1644Q3SXP7 199 aa7.5□□□□□ -1.21
RTF1-202ENST00000462276 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
RTF1-202ENST00000462276 NRACQ8N912 160 aa7.5□□□□□ -1.21
RTF1-202ENST00000462276 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
RTF1-202ENST00000462276 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 K7EMI3 77 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 VCYO14598 125 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 SRIP30626 198 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 RAB5BP61020 215 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 C15orf53Q8NAA6 179 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 PHLDA1Q8WV24 401 aaPredicted RBP7.49□□□□□ -1.21
RTF1-202ENST00000462276 MAP1LC3AQ9H492 121 aa7.49□□□□□ -1.21
RTF1-202ENST00000462276 NXT2Q9NPJ8 142 aaKnown RBP7.49□□□□□ -1.21
RTF1-202ENST00000462276 COL7A1Q02388 2944 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 TRBV27A0A0K0K1C4 114 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 NPYP01303 97 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 GYPEP15421 78 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 PMCHP20382 165 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
RTF1-202ENST00000462276 TCTAP57738 103 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 Q0VG73 95 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 NEXN-AS1Q8NBZ9 246 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 KLK5Q9Y337 293 aaPredicted RBP7.48□□□□□ -1.21
RTF1-202ENST00000462276 ICOSQ9Y6W8 199 aa7.48□□□□□ -1.21
RTF1-202ENST00000462276 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 SDHAF1A6NFY7 115 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 SMKR1H3BMG3 65 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 NCR2O95944 276 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 G0S2P27469 103 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 UBE2D3P61077 147 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 UBE2D2P62837 147 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 CEMP1Q6PRD7 247 aaPredicted RBP7.47□□□□□ -1.21
RTF1-202ENST00000462276 ZNRF2Q8NHG8 242 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
RTF1-202ENST00000462276 KIR2DL4Q99706 377 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 TMEM70Q9BUB7 260 aa7.47□□□□□ -1.21
RTF1-202ENST00000462276 GAGE12JA6NER3 117 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 I3L3M4 83 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 LINC00694P0DN24 101 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 TIRAPP58753 221 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 GAGE1Q13065 139 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 GAGE4Q13068 117 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 GAGE5Q13069 117 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 GAGE13Q4V321 117 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 NEGR1Q7Z3B1 354 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 Q8N8P6 123 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 PRSS3P2Q8NHM4 247 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 C18orf32Q8TCD1 76 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 WWC2-AS2Q96NR7 200 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 SMIM2Q9BVW6 85 aa7.46□□□□□ -1.22
RTF1-202ENST00000462276 A0A0J9YY99 117 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 LINC01549A6NIU2 74 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BKO60814 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 GAS8-AS1O95177 125 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BJP06899 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 P0DMU3 169 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BOP23527 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BBP33778 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BDP58876 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BCP62807 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST2H2BEQ16778 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BHQ93079 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BNQ99877 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 HIST1H2BMQ99879 126 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
RTF1-202ENST00000462276 LINC01546A6NGU7 62 aa7.44□□□□□ -1.22
RTF1-202ENST00000462276 LINC00614P0C842 121 aa7.44□□□□□ -1.22
RTF1-202ENST00000462276 COTL1Q14019 142 aa7.44□□□□□ -1.22
RTF1-202ENST00000462276 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
RTF1-202ENST00000462276 FA2HQ7L5A8 372 aa7.44□□□□□ -1.22
RTF1-202ENST00000462276 BAGE3Q86Y29 109 aa7.44□□□□□ -1.22
RTF1-202ENST00000462276 CHCHD1Q96BP2 118 aaKnown RBP7.44□□□□□ -1.22
RTF1-202ENST00000462276 Q9UF83 564 aa7.44□□□□□ -1.22
RTF1-202ENST00000462276 IGLV2-18A0A075B6J9 118 aa7.43□□□□□ -1.22
RTF1-202ENST00000462276 A0A096LPF7 62 aa7.43□□□□□ -1.22
RTF1-202ENST00000462276 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
RTF1-202ENST00000462276 LOC389332A0A1B0GUA5 103 aa7.43□□□□□ -1.22
RTF1-202ENST00000462276 FCER1GP30273 86 aa7.43□□□□□ -1.22
RTF1-202ENST00000462276 ORMDL2Q53FV1 153 aa7.43□□□□□ -1.22
RTF1-202ENST00000462276 MUC7Q8TAX7 377 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms