RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
APP-211ENST00000462267 RAB2AP61019 212 aa9.35□□□□□ -0.91
APP-211ENST00000462267 CACNG7P62955 275 aa9.35□□□□□ -0.91
APP-211ENST00000462267 ZNF56Q15929 161 aa9.35□□□□□ -0.91
APP-211ENST00000462267 IGHV1-24A0A0C4DH33 117 aa9.34□□□□□ -0.91
APP-211ENST00000462267 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
APP-211ENST00000462267 PRR4Q16378 134 aa9.34□□□□□ -0.91
APP-211ENST00000462267 NUDT15Q9NV35 164 aa9.34□□□□□ -0.91
APP-211ENST00000462267 PKIGQ9Y2B9 76 aa9.34□□□□□ -0.91
APP-211ENST00000462267 TRAV34A0A0B4J273 112 aa9.33□□□□□ -0.92
APP-211ENST00000462267 H0YIZ8 118 aa9.33□□□□□ -0.92
APP-211ENST00000462267 LYRM1O43325 122 aa9.33□□□□□ -0.92
APP-211ENST00000462267 STAG3L2P0CL84 134 aa9.33□□□□□ -0.92
APP-211ENST00000462267 STAG3L3P0CL85 134 aa9.33□□□□□ -0.92
APP-211ENST00000462267 GCHFRP30047 84 aa9.33□□□□□ -0.92
APP-211ENST00000462267 CRIP1P50238 77 aa9.33□□□□□ -0.92
APP-211ENST00000462267 LRRC37A5PQ49AS3 106 aa9.33□□□□□ -0.92
APP-211ENST00000462267 SH2D1AO60880 128 aa9.32□□□□□ -0.92
APP-211ENST00000462267 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
APP-211ENST00000462267 PRR26Q8N8Z3 221 aa9.32□□□□□ -0.92
APP-211ENST00000462267 HSPB11Q9Y547 144 aa9.32□□□□□ -0.92
APP-211ENST00000462267 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
APP-211ENST00000462267 PLA2G10O15496 165 aa9.31□□□□□ -0.92
APP-211ENST00000462267 UPK1BO75841 260 aa9.31□□□□□ -0.92
APP-211ENST00000462267 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
APP-211ENST00000462267 FAM162BQ5T6X4 162 aa9.31□□□□□ -0.92
APP-211ENST00000462267 AQP10Q96PS8 301 aa9.31□□□□□ -0.92
APP-211ENST00000462267 GFRA4Q9GZZ7 299 aa9.31□□□□□ -0.92
APP-211ENST00000462267 TMSB15BA0A087X1C1 80 aa9.3□□□□□ -0.92
APP-211ENST00000462267 GAGE12HA6NDE8 117 aa9.3□□□□□ -0.92
APP-211ENST00000462267 F5H697 171 aa9.3□□□□□ -0.92
APP-211ENST00000462267 H2AFB2P0C5Z0 115 aa9.3□□□□□ -0.92
APP-211ENST00000462267 LINC01559Q495D7 138 aa9.3□□□□□ -0.92
APP-211ENST00000462267 COX8CQ7Z4L0 72 aa9.3□□□□□ -0.92
APP-211ENST00000462267 Q86TA4 180 aa9.3□□□□□ -0.92
APP-211ENST00000462267 SMIM3Q9BZL3 60 aa9.3□□□□□ -0.92
APP-211ENST00000462267 TMEM167BQ9NRX6 74 aa9.3□□□□□ -0.92
APP-211ENST00000462267 GVQW2A0A096LPI5 108 aaPredicted RBP9.29□□□□□ -0.92
APP-211ENST00000462267 SULT1A2P50226 295 aa9.29□□□□□ -0.92
APP-211ENST00000462267 MZT2BQ6NZ67 158 aa9.29□□□□□ -0.92
APP-211ENST00000462267 SIX6O95475 246 aa9.28□□□□□ -0.92
APP-211ENST00000462267 CYCSP99999 105 aaKnown RBP9.28□□□□□ -0.92
APP-211ENST00000462267 RAB24Q969Q5 203 aa9.28□□□□□ -0.92
APP-211ENST00000462267 TMEM243Q9BU79 118 aa9.28□□□□□ -0.92
APP-211ENST00000462267 ZFP30Q9Y2G7 519 aa9.28□□□□□ -0.92
APP-211ENST00000462267 FAM240BA0A1B0GVZ2 78 aa9.27□□□□□ -0.93
APP-211ENST00000462267 A0A1W2PRE2 83 aa9.27□□□□□ -0.93
APP-211ENST00000462267 DEFA1P59665 94 aa9.27□□□□□ -0.93
APP-211ENST00000462267 DEFA3P59666 94 aa9.27□□□□□ -0.93
APP-211ENST00000462267 ZNF674Q2M3X9 581 aa9.27□□□□□ -0.93
APP-211ENST00000462267 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
APP-211ENST00000462267 ZNF471Q9BX82 626 aaPredicted RBP9.27□□□□□ -0.93
APP-211ENST00000462267 CXorf1O96002 111 aa9.26□□□□□ -0.93
APP-211ENST00000462267 IFITM3Q01628 133 aa9.26□□□□□ -0.93
APP-211ENST00000462267 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
APP-211ENST00000462267 WFDC1Q9HC57 220 aa9.26□□□□□ -0.93
APP-211ENST00000462267 PEX7O00628 323 aa9.25□□□□□ -0.93
APP-211ENST00000462267 MT-ND6P03923 174 aa9.25□□□□□ -0.93
APP-211ENST00000462267 RPL12P30050 165 aaKnown RBP9.25□□□□□ -0.93
APP-211ENST00000462267 FER1L6-AS1Q8NA97 138 aa9.25□□□□□ -0.93
APP-211ENST00000462267 INO80EQ8NBZ0 244 aaPredicted RBP9.25□□□□□ -0.93
APP-211ENST00000462267 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
APP-211ENST00000462267 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
APP-211ENST00000462267 PPP1R1CQ8WVI7 109 aa9.24□□□□□ -0.93
APP-211ENST00000462267 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
APP-211ENST00000462267 UBE2L6O14933 153 aa9.23□□□□□ -0.93
APP-211ENST00000462267 SMIM17P0DL12 118 aa9.23□□□□□ -0.93
APP-211ENST00000462267 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
APP-211ENST00000462267 FSIP2Q5CZC0 6907 aa9.22□□□□□ -0.93
APP-211ENST00000462267 PET100P0DJ07 73 aa9.22□□□□□ -0.93
APP-211ENST00000462267 C1orf137Q5JT78 98 aa9.22□□□□□ -0.93
APP-211ENST00000462267 SPANXN1Q5VSR9 72 aa9.22□□□□□ -0.93
APP-211ENST00000462267 CHCHD10Q8WYQ3 142 aaPredicted RBP9.22□□□□□ -0.93
APP-211ENST00000462267 CARD19Q96LW7 228 aa9.22□□□□□ -0.93
APP-211ENST00000462267 IGKV3OR2-268A0A0C4DH90 116 aa9.21□□□□□ -0.94
APP-211ENST00000462267 M0QY20 66 aa9.21□□□□□ -0.94
APP-211ENST00000462267 SNAI2O43623 268 aa9.21□□□□□ -0.94
APP-211ENST00000462267 MPC2O95563 127 aa9.21□□□□□ -0.94
APP-211ENST00000462267 MBP02144 154 aa9.21□□□□□ -0.94
APP-211ENST00000462267 CXCL1P09341 107 aa9.21□□□□□ -0.94
APP-211ENST00000462267 PTTG1IPP53801 180 aa9.21□□□□□ -0.94
APP-211ENST00000462267 FMC1Q96HJ9 113 aa9.21□□□□□ -0.94
APP-211ENST00000462267 SSBP4Q9BWG4 385 aaPredicted RBP9.21□□□□□ -0.94
APP-211ENST00000462267 NKX6-2Q9C056 277 aaPredicted RBP9.21□□□□□ -0.94
APP-211ENST00000462267 OR5AL1P0C617 328 aa9.2□□□□□ -0.94
APP-211ENST00000462267 UBE2G1P62253 170 aa9.2□□□□□ -0.94
APP-211ENST00000462267 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
APP-211ENST00000462267 PGLYRP4Q96LB8 373 aa9.2□□□□□ -0.94
APP-211ENST00000462267 ACTR3CQ9C0K3 210 aaPredicted RBP9.2□□□□□ -0.94
APP-211ENST00000462267 A0A1W2PNN7 141 aa9.19□□□□□ -0.94
APP-211ENST00000462267 AMTP48728 403 aa9.19□□□□□ -0.94
APP-211ENST00000462267 AP1S3Q96PC3 154 aa9.19□□□□□ -0.94
APP-211ENST00000462267 PSMG3Q9BT73 122 aaPredicted RBP9.19□□□□□ -0.94
APP-211ENST00000462267 MED28Q9H204 178 aa9.19□□□□□ -0.94
APP-211ENST00000462267 TRAV1-1A0A0B4J248 108 aa9.18□□□□□ -0.94
APP-211ENST00000462267 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
APP-211ENST00000462267 INMT-MINDY4F8WBC2 141 aa9.18□□□□□ -0.94
APP-211ENST00000462267 H0Y9J4 135 aa9.18□□□□□ -0.94
APP-211ENST00000462267 LTAP01374 205 aa9.18□□□□□ -0.94
APP-211ENST00000462267 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms