RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 LRP1BQ9NZR2 4599 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 TRBV10-1A0A0K0K1A3 114 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 PKIAP61925 76 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 RPL23P62829 140 aaKnown RBP5.98□□□□□ -1.45
LDB1-203ENST00000461873 ADIRFQ15847 76 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 CENPWQ5EE01 88 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 DNLZQ5SXM8 178 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 SFRP2Q96HF1 295 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 BIN3Q9NQY0 253 aa5.98□□□□□ -1.45
LDB1-203ENST00000461873 XKRY2A2RUG3 117 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 K7EN84 100 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 IGLV2-8P01709 118 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 CRPP02741 224 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 FUSP35637 526 aaKnown RBP eCLIP5.97□□□□□ -1.45
LDB1-203ENST00000461873 GNG4P50150 75 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 CRIP1P50238 77 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 SSTP61278 116 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 COX8CQ7Z4L0 72 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 C14orf178Q8N769 122 aaPredicted RBP5.97□□□□□ -1.45
LDB1-203ENST00000461873 TPPP3Q9BW30 176 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 SAMD10Q9BYL1 202 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 JPT2Q9H910 190 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 NAT8Q9UHE5 227 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 CARHSP1Q9Y2V2 147 aaKnown RBP5.97□□□□□ -1.45
LDB1-203ENST00000461873 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
LDB1-203ENST00000461873 TRBV7-3A0A075B6L6 115 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 IGKV2D-24A0A075B6R9 120 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 RPS20P60866 119 aaKnown RBP5.96□□□□□ -1.46
LDB1-203ENST00000461873 RAB4BP61018 213 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 Q0VG73 95 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 FAM74A3Q4VXF1 159 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 TMEM97Q5BJF2 176 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 Q6ZSN1 163 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 Q8N814 137 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 CLRN3Q8NCR9 226 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 RPS10P5Q9NQ39 176 aa5.96□□□□□ -1.46
LDB1-203ENST00000461873 C7orf77A4D0Y5 90 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 H7C1H1 209 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 NDUFS6O75380 124 aaKnown RBP5.95□□□□□ -1.46
LDB1-203ENST00000461873 CXCL1P09341 107 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 DAZ4Q86SG3 579 aaKnown RBP5.95□□□□□ -1.46
LDB1-203ENST00000461873 LINC01551Q86U37 167 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 UBE2WQ96B02 151 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 AP1S3Q96PC3 154 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 CHCHD7Q9BUK0 85 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 RNASE7Q9H1E1 156 aaKnown RBP5.95□□□□□ -1.46
LDB1-203ENST00000461873 DAZ3Q9NR90 486 aaKnown RBP5.95□□□□□ -1.46
LDB1-203ENST00000461873 HSPG2P98160 4391 aa5.95□□□□□ -1.46
LDB1-203ENST00000461873 MGPP08493 103 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 RPL19P84098 196 aaKnown RBP5.94□□□□□ -1.46
LDB1-203ENST00000461873 C14orf177Q52M58 125 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 SVBPQ8N300 66 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 Q8N976 141 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 CHCHD5Q9BSY4 110 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 TMEM70Q9BUB7 260 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 C1orf43Q9BWL3 253 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 KLK12Q9UKR0 248 aa5.94□□□□□ -1.46
LDB1-203ENST00000461873 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.93□□□□□ -1.46
LDB1-203ENST00000461873 MUC21A0A0G2JKD1 596 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 MUC21A0A140T8X8 626 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 SNAPINO95295 136 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 P01737 135 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 ANGP03950 147 aaKnown RBP5.93□□□□□ -1.46
LDB1-203ENST00000461873 OR5AL1P0C617 328 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 INAFM2P0DMQ5 153 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 KRTAP10-1P60331 282 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 CACNG7P62955 275 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 UFSP1Q6NVU6 142 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 NIT1Q86X76 327 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 NUDT10Q8NFP7 164 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 OR2D3Q8NGH3 330 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 OR10AG1Q8NH19 301 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 ISOC2Q96AB3 205 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 NUDT11Q96G61 164 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 MLST8Q9BVC4 326 aa5.93□□□□□ -1.46
LDB1-203ENST00000461873 APOBP04114 4563 aaKnown RBP5.92□□□□□ -1.46
LDB1-203ENST00000461873 TRBV25-1A0A075B6N4 114 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 TRBV6-8A0A0A6YYG3 113 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 LRCOL1A6NCL2 159 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 F2Z2F3 143 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 LECT2O14960 151 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 GATCO43716 136 aaKnown RBP5.92□□□□□ -1.46
LDB1-203ENST00000461873 TRGC1P0CF51 173 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 GZMBP10144 247 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 UBE2D3P61077 147 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 UBE2D2P62837 147 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 Q5VSD8 79 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 SMIM15Q7Z3B0 74 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 FER1L6-AS1Q8NA97 138 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 OR10G8Q8NGN5 311 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 BAALCQ8WXS3 180 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 SMIM12Q96EX1 92 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
LDB1-203ENST00000461873 UBE2L6O14933 153 aa5.91□□□□□ -1.46
LDB1-203ENST00000461873 SNAI2O43623 268 aa5.91□□□□□ -1.46
LDB1-203ENST00000461873 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
LDB1-203ENST00000461873 LINC00694P0DN24 101 aa5.91□□□□□ -1.46
LDB1-203ENST00000461873 PNRC1Q12796 327 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms