RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SAR1AQ9NR31 198 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 MPC1Q9Y5U8 109 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 CHCHD2Q9Y6H1 151 aaPredicted RBP0.93□□□□□ -2.26
HDAC6-212ENST00000461608 SERP1Q9Y6X1 66 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 BTAF1O14981 1849 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 NHSQ6T4R5 1651 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 LMO7Q8WWI1 1683 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 LAMB2P55268 1798 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 RGPD5Q99666 1765 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 LRRC37A3O60309 1634 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 PAPPAQ13219 1627 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 ATP7BP35670 1465 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 CDK5RAP2Q96SN8 1893 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 LY75O60449 1722 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 DIDO1Q9BTC0 2240 aaKnown RBP0.92□□□□□ -2.26
HDAC6-212ENST00000461608 ARFGEF1Q9Y6D6 1849 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 VPS8Q8N3P4 1428 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 PIK3C2AO00443 1686 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 TNRC6CQ9HCJ0 1690 aaKnown RBP0.92□□□□□ -2.26
HDAC6-212ENST00000461608 FBN3Q75N90 2809 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 PNMA8CA0A1B0GUJ8 204 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 IFITM5A6NNB3 132 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 MCRIP1C9JLW8 97 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 J3QLW9 94 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 CCL16O15467 120 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 IGKCP01834 107 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 PIRTP0C851 137 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 CXCL8P10145 99 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 IFITM1P13164 125 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 PKIAP61925 76 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 Q56UQ5 140 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 LINC01545Q5VT33 79 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 OR2T2Q6IF00 324 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 CASC2Q6XLA1 102 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 SLC25A26Q70HW3 274 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 SVBPQ8N300 66 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 ACBD7Q8N6N7 88 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 ATP6V0E2Q8NHE4 81 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 TSKUQ8WUA8 353 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 NAA60Q9H7X0 242 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 TMEM242Q9NWH2 141 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 ORMDL1Q9P0S3 153 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 IER3IP1Q9Y5U9 82 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 TULP4Q9NRJ4 1543 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 TRPM1Q7Z4N2 1603 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 CICQ96RK0 1608 aaPredicted RBP0.92□□□□□ -2.26
HDAC6-212ENST00000461608 EML6Q6ZMW3 1958 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 EXPH5Q8NEV8 1989 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 PKD1L3Q7Z443 1732 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 NUP98P52948 1817 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 VIRMAQ69YN4 1812 aaKnown RBP0.92□□□□□ -2.26
HDAC6-212ENST00000461608 SPEF2Q9C093 1822 aa0.92□□□□□ -2.26
HDAC6-212ENST00000461608 MYH7BA7E2Y1 1941 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 QRICH2Q9H0J4 1663 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 C10orf71Q711Q0 1435 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 ABCC6O95255 1503 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 MGAMO43451 1857 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 UBR3Q6ZT12 1888 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 A0A1W2PRS3 328 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 APOC4-APOC2K7ER74 178 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 NUPR1O60356 82 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 YPEL1O60688 119 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 APOC2P02655 101 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 ADCYAP1P18509 176 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 UBE2G1P62253 170 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 BTG2P78543 158 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 RBM3P98179 157 aaKnown RBP0.91□□□□□ -2.26
HDAC6-212ENST00000461608 Q6ZS92 163 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 PATE1Q8WXA2 126 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 COPS9Q8WXC6 57 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 SPTSSAQ969W0 71 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 DSCR8Q96T75 97 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 SNHG12Q9BXW3 62 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 NDUFA12Q9UI09 145 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 KIAA1551Q9HCM1 1747 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 C5P01031 1676 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 USP54Q70EL1 1684 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 FAM208AQ9UK61 1670 aaKnown RBP0.91□□□□□ -2.26
HDAC6-212ENST00000461608 LTN1O94822 1766 aa0.91□□□□□ -2.26
HDAC6-212ENST00000461608 PDE4DIPQ5VU43 2346 aa0.9□□□□□ -2.26
HDAC6-212ENST00000461608 ANKRD31Q8N7Z5 1873 aa0.9□□□□□ -2.26
HDAC6-212ENST00000461608 CASP8AP2Q9UKL3 1982 aa0.9□□□□□ -2.26
HDAC6-212ENST00000461608 DOT1LQ8TEK3 1739 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 AKAP11Q9UKA4 1901 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 IGLV3-32A0A0A0MS00 114 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 F8W1H4 67 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 NDUFB6O95139 128 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 TNFP01375 233 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 SLC25A6P12236 298 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 SNCAP37840 140 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 INSL4Q14641 139 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 ASB16-AS1Q495Z4 193 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 CSAG1Q6PB30 78 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 ZNF833PQ6ZTB9 187 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 PLPP5Q8NEB5 264 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 SPTSSBQ8NFR3 76 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 OR10AG1Q8NH19 301 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 VSTM2AQ8TAG5 236 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 DYNLRB2Q8TF09 96 aa0.9□□□□□ -2.27
HDAC6-212ENST00000461608 LIMD2Q9BT23 127 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms