RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 TNFRSF18Q9Y5U5 241 aa4.94□□□□□ -1.62
MSH2-204ENST00000461394 SORL1Q92673 2214 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 IGLV2-18A0A075B6J9 118 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 A0A096LNJ9 63 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 SDHAF1A6NFY7 115 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 GAGE10A6NGK3 116 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 LINC01546A6NGU7 62 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.93□□□□□ -1.62
MSH2-204ENST00000461394 IGHV3-53P01767 116 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 EMP1P54849 157 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 LINC00315P59091 139 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 C11orf72Q8NBR9 251 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 SPATA3Q8NHX4 192 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 NOP10Q9NPE3 64 aaKnown RBP4.93□□□□□ -1.62
MSH2-204ENST00000461394 PLA2G2DQ9UNK4 145 aa4.93□□□□□ -1.62
MSH2-204ENST00000461394 TRGV2A0A075B6R0 118 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 KIR2DL5BA0A0G2JN68 375 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 KIR2DL5BA0A0G2JPC4 375 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 hDV102S1A0JD36 115 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 K7EMI3 77 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 M0QY20 66 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 RS1O15537 224 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 APOC4P55056 127 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 LGALS9BQ3B8N2 356 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 MAJINQ3KP22 176 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 PIK3CD-AS1Q5SR53 167 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 LINC01545Q5VT33 79 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 CFAP126Q5VTH2 177 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 LGALS9CQ6DKI2 356 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 C2orf66Q6UXQ4 117 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 KIR2DL5AQ8N109 375 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 PTH2Q96A98 100 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 CYSLTR1Q9Y271 337 aa4.92□□□□□ -1.62
MSH2-204ENST00000461394 ANK3Q12955 4377 aaKnown RBP4.92□□□□□ -1.62
MSH2-204ENST00000461394 TRBV6-5A0A0K0K1A5 114 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 GAGE12BA1L429 117 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 CYSRT1A8MQ03 144 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 I3L3M4 83 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 GAGE7O76087 117 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 GIG44P09565 113 aaPredicted RBP4.91□□□□□ -1.62
MSH2-204ENST00000461394 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 P0DMU3 169 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 FAM231AP0DMU4 169 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 FAM231CP0DMU5 169 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 HNRNPA3P51991 378 aaKnown RBP4.91□□□□□ -1.62
MSH2-204ENST00000461394 RPL32P62910 135 aaKnown RBP4.91□□□□□ -1.62
MSH2-204ENST00000461394 ZFP2Q6ZN57 461 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 Q6ZTI0 123 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 RNASE8Q8TDE3 154 aaKnown RBP4.91□□□□□ -1.62
MSH2-204ENST00000461394 TOMM6Q96B49 74 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 MIEN1Q9BRT3 115 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 UQCR10Q9UDW1 63 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 TP53TG1Q9Y2A0 90 aa4.91□□□□□ -1.62
MSH2-204ENST00000461394 FN1P02751 2386 aaKnown RBP4.9□□□□□ -1.62
MSH2-204ENST00000461394 TRAV4A0A0B4J268 109 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 TRGV4A0A0C4DH28 118 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 LINC01549A6NIU2 74 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 PCP4P48539 62 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.63
MSH2-204ENST00000461394 TCTAP57738 103 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 RHOHQ15669 191 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
MSH2-204ENST00000461394 PHLDA1Q8WV24 401 aaPredicted RBP4.9□□□□□ -1.63
MSH2-204ENST00000461394 C14orf144Q96I85 54 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 DNAJC30Q96LL9 226 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 NDUFAF3Q9BU61 184 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 DKK2Q9UBU2 259 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 OTOGQ6ZRI0 2925 aa4.9□□□□□ -1.63
MSH2-204ENST00000461394 NACAE9PAV3 2078 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 IGHV3-38A0A0C4DH36 116 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 TRBV27A0A0K0K1C4 114 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 K7EQD1 137 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 DPM2O94777 84 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 IGKCP01834 107 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 DAZ2Q13117 558 aaKnown RBP4.89□□□□□ -1.63
MSH2-204ENST00000461394 BATFQ16520 125 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 DEFB135Q30KP9 77 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 NEXN-AS1Q8NBZ9 246 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 CSNK1G2-AS1Q8NCQ2 148 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 WFDC9Q8NEX5 89 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 ZNRF2Q8NHG8 242 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 IL17DQ8TAD2 202 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 ZNF479Q96JC4 524 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 CHTOPQ9Y3Y2 248 aaKnown RBP4.89□□□□□ -1.63
MSH2-204ENST00000461394 MTORP42345 2549 aa4.89□□□□□ -1.63
MSH2-204ENST00000461394 A0A087WX48 190 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 GAGE12JA6NER3 117 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 SMIM9A6NGZ8 99 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 TSHBP01222 138 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 IGLC3P0DOY3 106 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 DEFB130BP0DP73 79 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 DEFB130AP0DP74 79 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 NMUP48645 174 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 RIPPLY3P57055 190 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 RPL39P62891 51 aaKnown RBP4.88□□□□□ -1.63
MSH2-204ENST00000461394 RPL36AP83881 106 aaKnown RBP4.88□□□□□ -1.63
MSH2-204ENST00000461394 GAGE1Q13065 139 aa4.88□□□□□ -1.63
MSH2-204ENST00000461394 GAGE4Q13068 117 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms