RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 VSIG2Q96IQ7 327 aa10.06□□□□□ -0.8
COL5A3-202ENST00000461214 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
COL5A3-202ENST00000461214 PLECQ15149 4684 aaKnown RBP10.06□□□□□ -0.8
COL5A3-202ENST00000461214 M0QY20 66 aa10.05□□□□□ -0.8
COL5A3-202ENST00000461214 RAB4AP20338 218 aa10.05□□□□□ -0.8
COL5A3-202ENST00000461214 TMEM136Q6ZRR5 245 aa10.05□□□□□ -0.8
COL5A3-202ENST00000461214 Q6ZSN1 163 aa10.05□□□□□ -0.8
COL5A3-202ENST00000461214 SH2D6Q7Z4S9 175 aa10.05□□□□□ -0.8
COL5A3-202ENST00000461214 RNF185Q96GF1 192 aa10.05□□□□□ -0.8
COL5A3-202ENST00000461214 GNB1LQ9BYB4 327 aa10.05□□□□□ -0.8
COL5A3-202ENST00000461214 TGIF2-C20orf24A0A0A6YYL0 155 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 A0A0J9YY99 117 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 IGLL5B9A064 214 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 PPP1R17O96001 155 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 PPBPP02775 128 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 LINC00694P0DN24 101 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 GYPEP15421 78 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
COL5A3-202ENST00000461214 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
COL5A3-202ENST00000461214 RPL36ALQ969Q0 106 aaKnown RBP10.04□□□□□ -0.8
COL5A3-202ENST00000461214 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
COL5A3-202ENST00000461214 SRIP30626 198 aa10.03□□□□□ -0.8
COL5A3-202ENST00000461214 MRPL51Q4U2R6 128 aaKnown RBP10.03□□□□□ -0.8
COL5A3-202ENST00000461214 KIAA1109Q2LD37 5005 aa10.02□□□□□ -0.8
COL5A3-202ENST00000461214 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
COL5A3-202ENST00000461214 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
COL5A3-202ENST00000461214 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
COL5A3-202ENST00000461214 NIT2Q9NQR4 276 aa10.02□□□□□ -0.81
COL5A3-202ENST00000461214 A0A096LPF7 62 aa10.01□□□□□ -0.81
COL5A3-202ENST00000461214 PHOX2AO14813 284 aa10.01□□□□□ -0.81
COL5A3-202ENST00000461214 ORMDL3Q8N138 153 aa10.01□□□□□ -0.81
COL5A3-202ENST00000461214 LAMTOR2Q9Y2Q5 125 aa10.01□□□□□ -0.81
COL5A3-202ENST00000461214 TRBV6-5A0A0K0K1A5 114 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 LOC100131303A0A0U1RQF7 123 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 NUDT3O95989 172 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 P0DMU3 169 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 FAM231AP0DMU4 169 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 FAM231CP0DMU5 169 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 CKS2P33552 79 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 OR10J3Q5JRS4 329 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 NEGR1Q7Z3B1 354 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 SREK1IP1Q8N9Q2 155 aaPredicted RBP10□□□□□ -0.81
COL5A3-202ENST00000461214 APLNQ9ULZ1 77 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
COL5A3-202ENST00000461214 D6R8Y8 96 aa9.99□□□□□ -0.81
COL5A3-202ENST00000461214 SCO1O75880 301 aa9.99□□□□□ -0.81
COL5A3-202ENST00000461214 NCR2O95944 276 aa9.99□□□□□ -0.81
COL5A3-202ENST00000461214 APCSP02743 223 aa9.99□□□□□ -0.81
COL5A3-202ENST00000461214 UBE2D3P61077 147 aa9.99□□□□□ -0.81
COL5A3-202ENST00000461214 UBE2D2P62837 147 aa9.99□□□□□ -0.81
COL5A3-202ENST00000461214 MRPL18Q9H0U6 180 aaKnown RBP9.99□□□□□ -0.81
COL5A3-202ENST00000461214 GAGE12JA6NER3 117 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 RPS10P46783 165 aaKnown RBP9.98□□□□□ -0.81
COL5A3-202ENST00000461214 TIRAPP58753 221 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 GAGE1Q13065 139 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 GAGE4Q13068 117 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 GAGE5Q13069 117 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 DAZ4Q86SG3 579 aaKnown RBP9.98□□□□□ -0.81
COL5A3-202ENST00000461214 NRACQ8N912 160 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 ATP6V0E2Q8NHE4 81 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 RPL39LQ96EH5 51 aaKnown RBP9.98□□□□□ -0.81
COL5A3-202ENST00000461214 DAZ3Q9NR90 486 aaKnown RBP9.98□□□□□ -0.81
COL5A3-202ENST00000461214 TRAPPC1Q9Y5R8 145 aa9.98□□□□□ -0.81
COL5A3-202ENST00000461214 COLCA2A8K830 154 aa9.97□□□□□ -0.81
COL5A3-202ENST00000461214 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
COL5A3-202ENST00000461214 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
COL5A3-202ENST00000461214 C20orf78Q9BR46 151 aa9.97□□□□□ -0.81
COL5A3-202ENST00000461214 ST20Q9HBF5 79 aa9.97□□□□□ -0.81
COL5A3-202ENST00000461214 Q9UF83 564 aa9.97□□□□□ -0.81
COL5A3-202ENST00000461214 SMKR1H3BMG3 65 aa9.96□□□□□ -0.82
COL5A3-202ENST00000461214 GAS8-AS1O95177 125 aa9.96□□□□□ -0.82
COL5A3-202ENST00000461214 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
COL5A3-202ENST00000461214 RAB5AP20339 215 aa9.96□□□□□ -0.82
COL5A3-202ENST00000461214 SUMO2P61956 95 aaKnown RBP9.96□□□□□ -0.82
COL5A3-202ENST00000461214 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.82
COL5A3-202ENST00000461214 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
COL5A3-202ENST00000461214 SDHAF1A6NFY7 115 aa9.95□□□□□ -0.82
COL5A3-202ENST00000461214 NPYP01303 97 aa9.95□□□□□ -0.82
COL5A3-202ENST00000461214 CCL18P55774 89 aa9.95□□□□□ -0.82
COL5A3-202ENST00000461214 GTSF1LQ9H1H1 148 aa9.95□□□□□ -0.82
COL5A3-202ENST00000461214 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
COL5A3-202ENST00000461214 FABP9Q0Z7S8 132 aa9.94□□□□□ -0.82
COL5A3-202ENST00000461214 TMEM70Q9BUB7 260 aa9.94□□□□□ -0.82
COL5A3-202ENST00000461214 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
COL5A3-202ENST00000461214 MAP1LC3AQ9H492 121 aa9.94□□□□□ -0.82
COL5A3-202ENST00000461214 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
COL5A3-202ENST00000461214 TCAPO15273 167 aa9.93□□□□□ -0.82
COL5A3-202ENST00000461214 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
COL5A3-202ENST00000461214 ALKBH7Q9BT30 221 aaPredicted RBP9.93□□□□□ -0.82
COL5A3-202ENST00000461214 MRPS16Q9Y3D3 137 aaKnown RBP9.93□□□□□ -0.82
COL5A3-202ENST00000461214 I3L3M4 83 aa9.92□□□□□ -0.82
COL5A3-202ENST00000461214 PMCHP20382 165 aa9.92□□□□□ -0.82
COL5A3-202ENST00000461214 COTL1Q14019 142 aa9.92□□□□□ -0.82
COL5A3-202ENST00000461214 KIAA1644Q3SXP7 199 aa9.92□□□□□ -0.82
COL5A3-202ENST00000461214 LELP1Q5T871 98 aa9.92□□□□□ -0.82
COL5A3-202ENST00000461214 LYPD5Q6UWN5 251 aa9.92□□□□□ -0.82
COL5A3-202ENST00000461214 UPK3BQ9BT76 320 aa9.92□□□□□ -0.82
COL5A3-202ENST00000461214 VCYO14598 125 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms