RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 PROK1P58294 105 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 ZNF415Q09FC8 603 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 BAALCQ8WXS3 180 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 EDA2RQ9HAV5 297 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 RIPPLY3P57055 190 aa10.16□□□□□ -0.78
PTPRN-210ENST00000460801 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
PTPRN-210ENST00000460801 LINC01587Q99440 93 aa10.16□□□□□ -0.78
PTPRN-210ENST00000460801 NOTCH2Q04721 2471 aa10.16□□□□□ -0.78
PTPRN-210ENST00000460801 OR11H12B2RN74 326 aa10.15□□□□□ -0.78
PTPRN-210ENST00000460801 LY6G6DO95868 133 aa10.15□□□□□ -0.78
PTPRN-210ENST00000460801 UFSP1Q6NVU6 142 aa10.15□□□□□ -0.78
PTPRN-210ENST00000460801 C11orf72Q8NBR9 251 aa10.15□□□□□ -0.78
PTPRN-210ENST00000460801 CHTOPQ9Y3Y2 248 aaKnown RBP10.15□□□□□ -0.78
PTPRN-210ENST00000460801 IGIPA6NJ69 53 aa10.15□□□□□ -0.78
PTPRN-210ENST00000460801 STHQ8IWL8 128 aa10.15□□□□□ -0.78
PTPRN-210ENST00000460801 TP53TG1Q9Y2A0 90 aa10.15□□□□□ -0.78
PTPRN-210ENST00000460801 SETXQ7Z333 2677 aaKnown RBP10.15□□□□□ -0.79
PTPRN-210ENST00000460801 A8MWV9 139 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 GAGE1Q13065 139 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 NACAE9PAV3 2078 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 PRSS29PA6NIE9 313 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 TSHBP01222 138 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 TMEM97Q5BJF2 176 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 DEFB104AQ8WTQ1 72 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 SPXQ9BT56 116 aa10.14□□□□□ -0.79
PTPRN-210ENST00000460801 SAP30O75446 220 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 RPL39P62891 51 aaKnown RBP10.13□□□□□ -0.79
PTPRN-210ENST00000460801 XCL2Q9UBD3 114 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 COX11Q9Y6N1 276 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 IGLV1-51P01701 117 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 CMC4P56277 68 aaPredicted RBP10.13□□□□□ -0.79
PTPRN-210ENST00000460801 RHOHQ15669 191 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 NSUN5P1Q3KNT7 163 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 ORAOV1Q8WV07 137 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 TMEM141Q96I45 108 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 TIMM17AQ99595 171 aa10.13□□□□□ -0.79
PTPRN-210ENST00000460801 BEAN1Q3B7T3 259 aa10.12□□□□□ -0.79
PTPRN-210ENST00000460801 Q6ZVH6 145 aa10.12□□□□□ -0.79
PTPRN-210ENST00000460801 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
PTPRN-210ENST00000460801 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
PTPRN-210ENST00000460801 I3L3M4 83 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 HSD52Q0P140 79 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 HIGD1BQ9P298 99 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 TAX1BP3O14907 124 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 P0DMU3 169 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 SEC11AP67812 179 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 CFAP126Q5VTH2 177 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 FAM110AQ9BQ89 295 aa10.11□□□□□ -0.79
PTPRN-210ENST00000460801 NIPBLQ6KC79 2804 aaeCLIP10.1□□□□□ -0.79
PTPRN-210ENST00000460801 AZU1P20160 251 aa10.1□□□□□ -0.79
PTPRN-210ENST00000460801 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
PTPRN-210ENST00000460801 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
PTPRN-210ENST00000460801 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
PTPRN-210ENST00000460801 PMVKQ15126 192 aa10.1□□□□□ -0.79
PTPRN-210ENST00000460801 C19orf73Q9NVV2 129 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 MRPL16Q9NX20 251 aaKnown RBP10.09□□□□□ -0.79
PTPRN-210ENST00000460801 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 RHODO00212 210 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 Q6ZSN1 163 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 MAPKAPK5-AS1Q8N8E1 139 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 CST9LQ9H4G1 147 aa10.09□□□□□ -0.79
PTPRN-210ENST00000460801 IGLV4-69A0A075B6H9 119 aa10.08□□□□□ -0.8
PTPRN-210ENST00000460801 RS1O15537 224 aa10.08□□□□□ -0.8
PTPRN-210ENST00000460801 NPSP0C0P6 89 aa10.08□□□□□ -0.8
PTPRN-210ENST00000460801 NDUFA11Q86Y39 141 aa10.08□□□□□ -0.8
PTPRN-210ENST00000460801 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
PTPRN-210ENST00000460801 IGHV3OR16-12A0A075B7B8 117 aa10.07□□□□□ -0.8
PTPRN-210ENST00000460801 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
PTPRN-210ENST00000460801 GIG44P09565 113 aaPredicted RBP10.07□□□□□ -0.8
PTPRN-210ENST00000460801 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
PTPRN-210ENST00000460801 RNASE8Q8TDE3 154 aaKnown RBP10.07□□□□□ -0.8
PTPRN-210ENST00000460801 TNFRSF18Q9Y5U5 241 aa10.07□□□□□ -0.8
PTPRN-210ENST00000460801 E9PLD3 99 aa10.06□□□□□ -0.8
PTPRN-210ENST00000460801 CHAC1Q9BUX1 264 aa10.06□□□□□ -0.8
PTPRN-210ENST00000460801 Q9UF83 564 aa10.06□□□□□ -0.8
PTPRN-210ENST00000460801 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
PTPRN-210ENST00000460801 WFDC10AQ9H1F0 79 aa10.06□□□□□ -0.8
PTPRN-210ENST00000460801 NSD1Q96L73 2696 aaPredicted RBP10.06□□□□□ -0.8
PTPRN-210ENST00000460801 NOTCH3Q9UM47 2321 aa10.05□□□□□ -0.8
PTPRN-210ENST00000460801 A6NDN8 102 aa10.05□□□□□ -0.8
PTPRN-210ENST00000460801 INAFM1C9JVW0 142 aa10.05□□□□□ -0.8
PTPRN-210ENST00000460801 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
PTPRN-210ENST00000460801 C2CD3Q4AC94 2353 aa10.05□□□□□ -0.8
PTPRN-210ENST00000460801 TMEM263Q8WUH6 116 aaKnown RBP10.05□□□□□ -0.8
PTPRN-210ENST00000460801 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
PTPRN-210ENST00000460801 OPRPNQ99935 248 aaPredicted RBP10.04□□□□□ -0.8
PTPRN-210ENST00000460801 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
PTPRN-210ENST00000460801 LINC00482Q8N8I6 264 aa10.03□□□□□ -0.8
PTPRN-210ENST00000460801 PRADC1Q9BSG0 188 aa10.03□□□□□ -0.8
PTPRN-210ENST00000460801 FN1P02751 2386 aaKnown RBP10.03□□□□□ -0.8
PTPRN-210ENST00000460801 EMP1P54849 157 aa10.03□□□□□ -0.8
PTPRN-210ENST00000460801 UBE2V1Q13404 147 aa10.03□□□□□ -0.8
PTPRN-210ENST00000460801 PYGO1Q9Y3Y4 419 aa10.03□□□□□ -0.8
PTPRN-210ENST00000460801 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
PTPRN-210ENST00000460801 TRGV1A0A0A0MS02 117 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms