RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 OR4C5Q8NGB2 326 aa10.15□□□□□ -0.79
PCNP-202ENST00000460231 PTH2Q96A98 100 aa10.15□□□□□ -0.79
PCNP-202ENST00000460231 A8MWV9 139 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 ESDP10768 282 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 AKR1D1P51857 326 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 PRSS3P2Q8NHM4 247 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 DKK2Q9UBU2 259 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 FBN3Q75N90 2809 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 PPBPP02775 128 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 OR10D4PQ8NGN7 298 aa10.14□□□□□ -0.79
PCNP-202ENST00000460231 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
PCNP-202ENST00000460231 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
PCNP-202ENST00000460231 AMTP48728 403 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 SPATA12Q7Z6I5 190 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 NEXN-AS1Q8NBZ9 246 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 TMEM70Q9BUB7 260 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 IGHV3-38A0A0C4DH36 116 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 FHL2Q14192 279 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 PIK3CD-AS1Q5SR53 167 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 PACRGQ96M98 296 aaPredicted RBP10.12□□□□□ -0.79
PCNP-202ENST00000460231 MAP1LC3AQ9H492 121 aa10.12□□□□□ -0.79
PCNP-202ENST00000460231 TGP01266 2768 aa10.11□□□□□ -0.79
PCNP-202ENST00000460231 TRAV4A0A0B4J268 109 aa10.11□□□□□ -0.79
PCNP-202ENST00000460231 SDHAF1A6NFY7 115 aa10.11□□□□□ -0.79
PCNP-202ENST00000460231 SMIM9A6NGZ8 99 aa10.11□□□□□ -0.79
PCNP-202ENST00000460231 POLR2KP53803 58 aaKnown RBP10.11□□□□□ -0.79
PCNP-202ENST00000460231 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
PCNP-202ENST00000460231 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
PCNP-202ENST00000460231 HSBP1O75506 76 aa10.11□□□□□ -0.79
PCNP-202ENST00000460231 MIFP14174 115 aa10.1□□□□□ -0.79
PCNP-202ENST00000460231 S100A2P29034 98 aa10.1□□□□□ -0.79
PCNP-202ENST00000460231 PHLDA1Q8WV24 401 aaPredicted RBP10.1□□□□□ -0.79
PCNP-202ENST00000460231 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
PCNP-202ENST00000460231 FA2HQ7L5A8 372 aa10.09□□□□□ -0.79
PCNP-202ENST00000460231 Q8N8P6 123 aa10.09□□□□□ -0.79
PCNP-202ENST00000460231 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
PCNP-202ENST00000460231 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
PCNP-202ENST00000460231 NIT2Q9NQR4 276 aa10.09□□□□□ -0.79
PCNP-202ENST00000460231 PYY3Q5JQD4 70 aa10.08□□□□□ -0.8
PCNP-202ENST00000460231 ST20Q9HBF5 79 aa10.08□□□□□ -0.8
PCNP-202ENST00000460231 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
PCNP-202ENST00000460231 ZFP2Q6ZN57 461 aa10.08□□□□□ -0.8
PCNP-202ENST00000460231 CHCHD1Q96BP2 118 aaKnown RBP10.08□□□□□ -0.8
PCNP-202ENST00000460231 TM2D3Q9BRN9 247 aa10.08□□□□□ -0.8
PCNP-202ENST00000460231 ZMAT5Q9UDW3 170 aaKnown RBP10.08□□□□□ -0.8
PCNP-202ENST00000460231 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 C12orf74Q32Q52 190 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 TRBV6-5A0A0K0K1A5 114 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 TSHBP01222 138 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 RPL39P62891 51 aaKnown RBP10.07□□□□□ -0.8
PCNP-202ENST00000460231 GAGE1Q13065 139 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 GAGE4Q13068 117 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 GAGE5Q13069 117 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
PCNP-202ENST00000460231 TRGV4A0A0C4DH28 118 aa10.06□□□□□ -0.8
PCNP-202ENST00000460231 A0A0J9YY99 117 aa10.06□□□□□ -0.8
PCNP-202ENST00000460231 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
PCNP-202ENST00000460231 K7EQD1 137 aa10.06□□□□□ -0.8
PCNP-202ENST00000460231 RHODO00212 210 aa10.06□□□□□ -0.8
PCNP-202ENST00000460231 HTN3P15516 51 aa10.06□□□□□ -0.8
PCNP-202ENST00000460231 TMEM18Q96B42 140 aa10.06□□□□□ -0.8
PCNP-202ENST00000460231 Q8N976 141 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
PCNP-202ENST00000460231 TP53TG1Q9Y2A0 90 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 DNAH7Q8WXX0 4024 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 A0A096LPF7 62 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 C3orf79P0CE67 100 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 BTF3P20290 206 aaKnown RBP10.05□□□□□ -0.8
PCNP-202ENST00000460231 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 Q6ZTC4 211 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
PCNP-202ENST00000460231 STARD9Q9P2P6 4700 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 NANOS2P60321 138 aaKnown RBP10.04□□□□□ -0.8
PCNP-202ENST00000460231 DAD1P61803 113 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 H0Y8G0 127 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 KRTDAPP60985 99 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 LAGE3Q14657 143 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 NTM-AS1Q6ZSK4 140 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
PCNP-202ENST00000460231 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
PCNP-202ENST00000460231 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
PCNP-202ENST00000460231 PLECQ15149 4684 aaKnown RBP10.03□□□□□ -0.8
PCNP-202ENST00000460231 SPART-AS1P0CW21 52 aa10.02□□□□□ -0.8
PCNP-202ENST00000460231 CRYBA4P53673 196 aa10.02□□□□□ -0.8
PCNP-202ENST00000460231 DEFA6Q01524 100 aa10.02□□□□□ -0.8
PCNP-202ENST00000460231 CEMP1Q6PRD7 247 aaPredicted RBP10.02□□□□□ -0.8
PCNP-202ENST00000460231 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
PCNP-202ENST00000460231 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
PCNP-202ENST00000460231 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms