RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 HBDP02042 147 aa17.44■□□□□ 0.38
U2AF1-204ENST00000459639 POLR2KP53803 58 aaKnown RBP17.44■□□□□ 0.38
U2AF1-204ENST00000459639 EMP1P54849 157 aa17.44■□□□□ 0.38
U2AF1-204ENST00000459639 PYY3Q5JQD4 70 aa17.44■□□□□ 0.38
U2AF1-204ENST00000459639 LINC00612Q8N6U2 182 aa17.44■□□□□ 0.38
U2AF1-204ENST00000459639 TRGV2A0A075B6R0 118 aa17.43■□□□□ 0.38
U2AF1-204ENST00000459639 LEPROTL1O95214 131 aa17.43■□□□□ 0.38
U2AF1-204ENST00000459639 ZNF479Q96JC4 524 aa17.43■□□□□ 0.38
U2AF1-204ENST00000459639 SDHAF1A6NFY7 115 aa17.42■□□□□ 0.38
U2AF1-204ENST00000459639 LAGE3Q14657 143 aa17.42■□□□□ 0.38
U2AF1-204ENST00000459639 JOSD1Q15040 202 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-204ENST00000459639 KPRPQ5T749 579 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-204ENST00000459639 Q6ZSN1 163 aa17.42■□□□□ 0.38
U2AF1-204ENST00000459639 LINC00518Q8N0U6 118 aa17.42■□□□□ 0.38
U2AF1-204ENST00000459639 TP53TG1Q9Y2A0 90 aa17.42■□□□□ 0.38
U2AF1-204ENST00000459639 IGHV4-28A0A0C4DH34 117 aa17.41■□□□□ 0.38
U2AF1-204ENST00000459639 VCYO14598 125 aa17.41■□□□□ 0.38
U2AF1-204ENST00000459639 FCER1GP30273 86 aa17.41■□□□□ 0.38
U2AF1-204ENST00000459639 Q8NAQ8 132 aa17.41■□□□□ 0.38
U2AF1-204ENST00000459639 C18orf15Q96N68 181 aa17.41■□□□□ 0.38
U2AF1-204ENST00000459639 TRBV27A0A0K0K1C4 114 aa17.4■□□□□ 0.38
U2AF1-204ENST00000459639 LYRM9A8MSI8 78 aa17.4■□□□□ 0.38
U2AF1-204ENST00000459639 TCAPO15273 167 aa17.4■□□□□ 0.38
U2AF1-204ENST00000459639 ORMDL2Q53FV1 153 aa17.4■□□□□ 0.38
U2AF1-204ENST00000459639 HSPB8Q9UJY1 196 aa17.4■□□□□ 0.38
U2AF1-204ENST00000459639 RIPPLY3P57055 190 aa17.39■□□□□ 0.37
U2AF1-204ENST00000459639 KRTDAPP60985 99 aa17.39■□□□□ 0.37
U2AF1-204ENST00000459639 DNAJC30Q96LL9 226 aa17.39■□□□□ 0.37
U2AF1-204ENST00000459639 C3orf79P0CE67 100 aa17.38■□□□□ 0.37
U2AF1-204ENST00000459639 P0DMU3 169 aa17.38■□□□□ 0.37
U2AF1-204ENST00000459639 FAM231AP0DMU4 169 aa17.38■□□□□ 0.37
U2AF1-204ENST00000459639 FAM231CP0DMU5 169 aa17.38■□□□□ 0.37
U2AF1-204ENST00000459639 C12orf57Q99622 126 aa17.38■□□□□ 0.37
U2AF1-204ENST00000459639 KIR2DL4Q99706 377 aa17.38■□□□□ 0.37
U2AF1-204ENST00000459639 NEGR1Q7Z3B1 354 aa17.37■□□□□ 0.37
U2AF1-204ENST00000459639 TNFRSF18Q9Y5U5 241 aa17.37■□□□□ 0.37
U2AF1-204ENST00000459639 FAM222AQ5U5X8 452 aa17.36■□□□□ 0.37
U2AF1-204ENST00000459639 LINC00173Q6ZV60 143 aa17.36■□□□□ 0.37
U2AF1-204ENST00000459639 NEXN-AS1Q8NBZ9 246 aa17.36■□□□□ 0.37
U2AF1-204ENST00000459639 K7EQD1 137 aa17.36■□□□□ 0.37
U2AF1-204ENST00000459639 TRBV10-1A0A0K0K1A3 114 aa17.35■□□□□ 0.37
U2AF1-204ENST00000459639 DEFB130BP0DP73 79 aa17.35■□□□□ 0.37
U2AF1-204ENST00000459639 DEFB130AP0DP74 79 aa17.35■□□□□ 0.37
U2AF1-204ENST00000459639 BTF3P20290 206 aaKnown RBP17.35■□□□□ 0.37
U2AF1-204ENST00000459639 DKK2Q9UBU2 259 aa17.35■□□□□ 0.37
U2AF1-204ENST00000459639 I3L3M4 83 aa17.34■□□□□ 0.37
U2AF1-204ENST00000459639 NUDT3O95989 172 aa17.34■□□□□ 0.37
U2AF1-204ENST00000459639 DNAH3Q8TD57 4116 aa17.34■□□□□ 0.37
U2AF1-204ENST00000459639 SCGB1D1O95968 90 aa17.33■□□□□ 0.37
U2AF1-204ENST00000459639 MAP1LC3CQ9BXW4 147 aa17.33■□□□□ 0.37
U2AF1-204ENST00000459639 TRGV4A0A0C4DH28 118 aa17.32■□□□□ 0.36
U2AF1-204ENST00000459639 TRBV6-4A0A1B0GX49 114 aa17.32■□□□□ 0.36
U2AF1-204ENST00000459639 DEFB4AO15263 64 aa17.32■□□□□ 0.36
U2AF1-204ENST00000459639 K7EIL1 84 aa17.32■□□□□ 0.36
U2AF1-204ENST00000459639 SLC25A29Q8N8R3 303 aa17.32■□□□□ 0.36
U2AF1-204ENST00000459639 Q9UF83 564 aa17.32■□□□□ 0.36
U2AF1-204ENST00000459639 SYS1-DBNDD2H3BUS1 97 aa17.31■□□□□ 0.36
U2AF1-204ENST00000459639 G0S2P27469 103 aa17.31■□□□□ 0.36
U2AF1-204ENST00000459639 FHL2Q14192 279 aa17.31■□□□□ 0.36
U2AF1-204ENST00000459639 RETNQ9HD89 108 aa17.31■□□□□ 0.36
U2AF1-204ENST00000459639 PRB2P02812 416 aaPredicted RBP17.3■□□□□ 0.36
U2AF1-204ENST00000459639 RHOHQ15669 191 aa17.3■□□□□ 0.36
U2AF1-204ENST00000459639 Q8N976 141 aa17.3■□□□□ 0.36
U2AF1-204ENST00000459639 TSHBP01222 138 aa17.29■□□□□ 0.36
U2AF1-204ENST00000459639 TOMM6Q96B49 74 aa17.29■□□□□ 0.36
U2AF1-204ENST00000459639 TEX48A0A1B0GUV7 120 aa17.29■□□□□ 0.36
U2AF1-204ENST00000459639 SPART-AS1P0CW21 52 aa17.29■□□□□ 0.36
U2AF1-204ENST00000459639 RPL36AP83881 106 aaKnown RBP17.29■□□□□ 0.36
U2AF1-204ENST00000459639 RPL36ALQ969Q0 106 aaKnown RBP17.29■□□□□ 0.36
U2AF1-204ENST00000459639 IFI27L1Q96BM0 104 aa17.29■□□□□ 0.36
U2AF1-204ENST00000459639 NBEAL2Q6ZNJ1 2754 aa17.28■□□□□ 0.36
U2AF1-204ENST00000459639 TRBV7-3A0A075B6L6 115 aa17.28■□□□□ 0.36
U2AF1-204ENST00000459639 LINC01549A6NIU2 74 aa17.28■□□□□ 0.36
U2AF1-204ENST00000459639 CDPF1Q6NVV7 123 aa17.28■□□□□ 0.36
U2AF1-204ENST00000459639 ATP5LO75964 103 aa17.27■□□□□ 0.36
U2AF1-204ENST00000459639 DAD1P61803 113 aa17.27■□□□□ 0.36
U2AF1-204ENST00000459639 PET117Q6UWS5 81 aa17.27■□□□□ 0.36
U2AF1-204ENST00000459639 C2orf66Q6UXQ4 117 aa17.27■□□□□ 0.36
U2AF1-204ENST00000459639 CELA1Q9UNI1 258 aa17.27■□□□□ 0.36
U2AF1-204ENST00000459639 NOTCH1P46531 2555 aa17.27■□□□□ 0.36
U2AF1-204ENST00000459639 SPATA12Q7Z6I5 190 aa17.26■□□□□ 0.35
U2AF1-204ENST00000459639 ZNRF2Q8NHG8 242 aa17.26■□□□□ 0.35
U2AF1-204ENST00000459639 PRADC1Q9BSG0 188 aa17.26■□□□□ 0.35
U2AF1-204ENST00000459639 CYSLTR1Q9Y271 337 aa17.26■□□□□ 0.35
U2AF1-204ENST00000459639 DEFB104AQ8WTQ1 72 aa17.25■□□□□ 0.35
U2AF1-204ENST00000459639 C11orf68Q9H3H3 251 aaKnown RBP17.25■□□□□ 0.35
U2AF1-204ENST00000459639 C20orf202A1L168 122 aa17.24■□□□□ 0.35
U2AF1-204ENST00000459639 SBSPONQ8IVN8 264 aa17.24■□□□□ 0.35
U2AF1-204ENST00000459639 UBE2D3P61077 147 aa17.23■□□□□ 0.35
U2AF1-204ENST00000459639 UBE2D2P62837 147 aa17.23■□□□□ 0.35
U2AF1-204ENST00000459639 MGAM2Q2M2H8 2515 aa17.23■□□□□ 0.35
U2AF1-204ENST00000459639 KRTAP21-3Q3LHN1 58 aa17.23■□□□□ 0.35
U2AF1-204ENST00000459639 DAZ4Q86SG3 579 aaKnown RBP17.23■□□□□ 0.35
U2AF1-204ENST00000459639 SCGB3A1Q96QR1 104 aa17.23■□□□□ 0.35
U2AF1-204ENST00000459639 DAZ3Q9NR90 486 aaKnown RBP17.23■□□□□ 0.35
U2AF1-204ENST00000459639 HHLA3Q9XRX5 114 aa17.23■□□□□ 0.35
U2AF1-204ENST00000459639 NBEAL1Q6ZS30 2694 aa17.22■□□□□ 0.35
U2AF1-204ENST00000459639 GAGE12JA6NER3 117 aa17.22■□□□□ 0.35
U2AF1-204ENST00000459639 GAGE1Q13065 139 aa17.22■□□□□ 0.35
U2AF1-204ENST00000459639 GAGE4Q13068 117 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms