RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RAB19A4D1S5 217 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 RAB4BP61018 213 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 UBE2D3P61077 147 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 UBE2D2P62837 147 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 CENPWQ5EE01 88 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 FAM30AQ9NZY2 134 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 DNAH8Q96JB1 4490 aa10.41□□□□□ -0.74
CHCHD3-204ENST00000457942 RBFOX3A6NFN3 312 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 F5H697 171 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 CRPP02741 224 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 SMIM17P0DL12 118 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 BLOC1S1P78537 153 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 CHCHD7Q9BUK0 85 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 MED9Q9NWA0 146 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 VAX2Q9UIW0 290 aa10.4□□□□□ -0.74
CHCHD3-204ENST00000457942 CXCL1P09341 107 aa10.39□□□□□ -0.75
CHCHD3-204ENST00000457942 Q8N976 141 aa10.38□□□□□ -0.75
CHCHD3-204ENST00000457942 NEXN-AS1Q8NBZ9 246 aa10.38□□□□□ -0.75
CHCHD3-204ENST00000457942 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
CHCHD3-204ENST00000457942 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
CHCHD3-204ENST00000457942 MLST8Q9BVC4 326 aa10.38□□□□□ -0.75
CHCHD3-204ENST00000457942 TPPP3Q9BW30 176 aa10.38□□□□□ -0.75
CHCHD3-204ENST00000457942 TRBV6-8A0A0A6YYG3 113 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 SNAI2O43623 268 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 PDE6DO43924 150 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 CEBPGP53567 150 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 Q0VG73 95 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 CHCHD5Q9BSY4 110 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 C1orf43Q9BWL3 253 aa10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 LRP1Q07954 4544 aaKnown RBP10.37□□□□□ -0.75
CHCHD3-204ENST00000457942 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
CHCHD3-204ENST00000457942 IGLV2-8P01709 118 aa10.36□□□□□ -0.75
CHCHD3-204ENST00000457942 GNG4P50150 75 aa10.36□□□□□ -0.75
CHCHD3-204ENST00000457942 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
CHCHD3-204ENST00000457942 TRBV20OR9-2A0A075B6H5 130 aa10.35□□□□□ -0.75
CHCHD3-204ENST00000457942 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
CHCHD3-204ENST00000457942 MGPP08493 103 aa10.35□□□□□ -0.75
CHCHD3-204ENST00000457942 PKIAP61925 76 aa10.35□□□□□ -0.75
CHCHD3-204ENST00000457942 MPV17L2Q567V2 206 aa10.35□□□□□ -0.75
CHCHD3-204ENST00000457942 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
CHCHD3-204ENST00000457942 SSBP4Q9BWG4 385 aaPredicted RBP10.35□□□□□ -0.75
CHCHD3-204ENST00000457942 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
CHCHD3-204ENST00000457942 GZMBP10144 247 aa10.34□□□□□ -0.75
CHCHD3-204ENST00000457942 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
CHCHD3-204ENST00000457942 HLA-DQA1P01909 254 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 TAGLN2P37802 199 aaKnown RBP10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 C14orf177Q52M58 125 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 Q6ZSA8 131 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 FER1L6-AS1Q8NA97 138 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 OR2D3Q8NGH3 330 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 LYPD6BQ8NI32 183 aa10.33□□□□□ -0.76
CHCHD3-204ENST00000457942 RPS20P60866 119 aaKnown RBP10.32□□□□□ -0.76
CHCHD3-204ENST00000457942 ATRAIDQ6UW56 229 aa10.32□□□□□ -0.76
CHCHD3-204ENST00000457942 EIF5A2Q9GZV4 153 aaKnown RBP10.32□□□□□ -0.76
CHCHD3-204ENST00000457942 TRBV25-1A0A075B6N4 114 aa10.31□□□□□ -0.76
CHCHD3-204ENST00000457942 GAGE6Q13070 117 aa10.31□□□□□ -0.76
CHCHD3-204ENST00000457942 CLPSL2Q6UWE3 100 aa10.31□□□□□ -0.76
CHCHD3-204ENST00000457942 TEX261Q6UWH6 196 aa10.31□□□□□ -0.76
CHCHD3-204ENST00000457942 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
CHCHD3-204ENST00000457942 SCXQ7RTU7 201 aa10.31□□□□□ -0.76
CHCHD3-204ENST00000457942 FAT3Q8TDW7 4589 aa10.31□□□□□ -0.76
CHCHD3-204ENST00000457942 XKRY2A2RUG3 117 aa10.3□□□□□ -0.76
CHCHD3-204ENST00000457942 H7C1H1 209 aa10.3□□□□□ -0.76
CHCHD3-204ENST00000457942 P01737 135 aa10.3□□□□□ -0.76
CHCHD3-204ENST00000457942 CACNG7P62955 275 aa10.3□□□□□ -0.76
CHCHD3-204ENST00000457942 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
CHCHD3-204ENST00000457942 FAM210AQ96ND0 272 aa10.3□□□□□ -0.76
CHCHD3-204ENST00000457942 C19orf71A6NCJ1 209 aa10.29□□□□□ -0.76
CHCHD3-204ENST00000457942 K7EN84 100 aa10.29□□□□□ -0.76
CHCHD3-204ENST00000457942 MIAQ16674 131 aa10.29□□□□□ -0.76
CHCHD3-204ENST00000457942 OCC1Q8TAD7 63 aa10.29□□□□□ -0.76
CHCHD3-204ENST00000457942 KIF25-AS1Q9Y6Z4 181 aa10.29□□□□□ -0.76
CHCHD3-204ENST00000457942 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 USP17L23D6RBM5 183 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 TMEM250H0YL14 139 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 IGLC6P0CF74 106 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 RBX1P62877 108 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 NTM-AS1Q6ZSK4 140 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 RNASE7Q9H1E1 156 aaKnown RBP10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 BIN3Q9NQY0 253 aa10.28□□□□□ -0.76
CHCHD3-204ENST00000457942 SRP19P09132 144 aaKnown RBP10.27□□□□□ -0.77
CHCHD3-204ENST00000457942 TRGC1P0CF51 173 aa10.27□□□□□ -0.77
CHCHD3-204ENST00000457942 LINC00269Q8N2A0 174 aa10.27□□□□□ -0.77
CHCHD3-204ENST00000457942 NUDT10Q8NFP7 164 aa10.27□□□□□ -0.77
CHCHD3-204ENST00000457942 NUDT11Q96G61 164 aa10.27□□□□□ -0.77
CHCHD3-204ENST00000457942 CHAC1Q9BUX1 264 aa10.27□□□□□ -0.77
CHCHD3-204ENST00000457942 F2Z2F3 143 aa10.26□□□□□ -0.77
CHCHD3-204ENST00000457942 M0QY20 66 aa10.26□□□□□ -0.77
CHCHD3-204ENST00000457942 SMIM7Q9BQ49 75 aa10.26□□□□□ -0.77
CHCHD3-204ENST00000457942 SRSF3P84103 164 aaKnown RBP10.25□□□□□ -0.77
CHCHD3-204ENST00000457942 IQCJQ1A5X6 159 aa10.25□□□□□ -0.77
CHCHD3-204ENST00000457942 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms