RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 RNASE4P34096 147 aaKnown RBP4.78□□□□□ -1.64
USP46-202ENST00000451218 FXYD7P58549 80 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 C7orf71A4D174 169 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 TSHBP01222 138 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 FGF6P10767 208 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 TRPT1Q86TN4 253 aaKnown RBP4.78□□□□□ -1.64
USP46-202ENST00000451218 BAGE3Q86Y29 109 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 VAMP8Q9BV40 100 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 Q6ZSN1 163 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 STHQ8IWL8 128 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 C1orf158Q8N1D5 194 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
USP46-202ENST00000451218 CHTOPQ9Y3Y2 248 aaKnown RBP4.77□□□□□ -1.65
USP46-202ENST00000451218 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 DNAL4O96015 105 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 LINC00482Q8N8I6 264 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 WFDC10AQ9H1F0 79 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 PRO1933Q9H354 126 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 TRAV21A0A0B4J279 112 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 CCL24O00175 119 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 PMCHP20382 165 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 SPINK13Q1W4C9 94 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 GTF2H5Q6ZYL4 71 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 SYS1-DBNDD2H3BUS1 97 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
USP46-202ENST00000451218 ORMDL3Q8N138 153 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 KIR2DL5BQ8NHK3 375 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 GEMIN7Q9H840 131 aaKnown RBP4.76□□□□□ -1.65
USP46-202ENST00000451218 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 GYPEP15421 78 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 CDKN1BP46527 198 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 PTH2Q96A98 100 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 KIR2DL4Q99706 377 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 HHLA3Q9XRX5 114 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 PLECQ15149 4684 aaKnown RBP4.76□□□□□ -1.65
USP46-202ENST00000451218 C2CD3Q4AC94 2353 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 DDTP30046 118 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 POLR2KP53803 58 aaKnown RBP4.76□□□□□ -1.65
USP46-202ENST00000451218 WFDC3Q8IUB2 231 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 TSSC4Q9Y5U2 329 aaPredicted RBP4.76□□□□□ -1.65
USP46-202ENST00000451218 IGLL1P15814 213 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 AZU1P20160 251 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 TFPI2P48307 235 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 CACNG7P62955 275 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 MPV17L2Q567V2 206 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 RNASEKQ6P5S7 137 aaKnown RBP4.76□□□□□ -1.65
USP46-202ENST00000451218 OVOL2Q9BRP0 275 aa4.76□□□□□ -1.65
USP46-202ENST00000451218 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 TMEM262E9PQX1 116 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 SCGB1D4Q6XE38 83 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 NDUFA12Q9UI09 145 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 JMJD1CQ15652 2540 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 OR2K2Q8NGT1 345 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 TENM3Q9P273 2699 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 A0A087WX48 190 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 M0QY20 66 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 IGLC3P0DOY3 106 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 SCGB1A1P11684 91 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 DEFB131AP59861 70 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 RPL32P62910 135 aaKnown RBP4.75□□□□□ -1.65
USP46-202ENST00000451218 FAM159AQ6UWV7 190 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 C15orf53Q8NAA6 179 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 FAM110AQ9BQ89 295 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 LAMTOR2Q9Y2Q5 125 aa4.75□□□□□ -1.65
USP46-202ENST00000451218 SETD2Q9BYW2 2564 aaPredicted RBP4.75□□□□□ -1.65
USP46-202ENST00000451218 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.74□□□□□ -1.65
USP46-202ENST00000451218 WIPF1O43516 503 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 SPANXN1Q5VSR9 72 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 RNASE8Q8TDE3 154 aaKnown RBP4.74□□□□□ -1.65
USP46-202ENST00000451218 SNHG12Q9BXW3 62 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 TNFRSF18Q9Y5U5 241 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 TRGV2A0A075B6R0 118 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 M0R381 172 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 CRLF1O75462 422 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 P0DMU3 169 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 FAM231AP0DMU4 169 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 FAM231CP0DMU5 169 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 SUMO4Q6EEV6 95 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 SLC25A34Q6PIV7 304 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 C2orf91Q6ZV80 131 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 NDUFAF3Q9BU61 184 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 CD7P09564 240 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 ATOH7Q8N100 152 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 Q8N8P6 123 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 NHP2Q9NX24 153 aaKnown RBP4.74□□□□□ -1.65
USP46-202ENST00000451218 IGHV1OR15-1A0A075B7D0 117 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 TRAV25A0A0B4J276 109 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 M0R143 59 aa4.74□□□□□ -1.65
USP46-202ENST00000451218 HNRNPA3P51991 378 aaKnown RBP4.74□□□□□ -1.65
USP46-202ENST00000451218 C14orf178Q8N769 122 aaPredicted RBP4.74□□□□□ -1.65
USP46-202ENST00000451218 TRBV6-5A0A0K0K1A5 114 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 C11orf68Q9H3H3 251 aaKnown RBP4.73□□□□□ -1.65
USP46-202ENST00000451218 LBHQ53QV2 105 aaPredicted RBP4.73□□□□□ -1.65
USP46-202ENST00000451218 LOC389332A0A1B0GUA5 103 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 IGKV3-20P01619 116 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 PSMB2P49721 201 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 S100A7L2Q5SY68 101 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 COX11Q9Y6N1 276 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms