RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 UBE2D4Q9Y2X8 147 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 CACNA1IQ9P0X4 2223 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 hDV103S1A0JD37 113 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 IGHV3-23P01764 117 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 WDR86Q86TI4 376 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 ADAMTS9Q9P2N4 1935 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 COL6A6A6NMZ7 2263 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 TRGV4A0A0C4DH28 118 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 A8MZ25 164 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 COX17Q14061 63 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 SERTAD4-AS1Q5TG53 156 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 Q8N6K4 173 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 KAAG1Q9UBP8 84 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 MAP1BP46821 2468 aaKnown RBP1.67□□□□□ -2.14
USP53-202ENST00000450251 TDRD6O60522 2096 aaKnown RBP1.66□□□□□ -2.14
USP53-202ENST00000450251 A0A096LNJ9 63 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGHV3-66A0A0C4DH42 116 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 K7EIM0 57 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGLV2-23P01705 113 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 HTN1P15515 57 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 MLANAQ16655 118 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 CRIP3Q6Q6R5 217 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 LINC00322Q6ZN03 302 aaPredicted RBP1.66□□□□□ -2.14
USP53-202ENST00000450251 POM121L12Q8N7R1 296 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 TMEM254Q8TBM7 123 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 FAM19A4Q96LR4 140 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGLV4-69A0A075B6H9 119 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGLV11-55A0A075B6I3 123 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGLV4-3A0A075B6K6 122 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 TRBV10-1A0A0K0K1A3 114 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 Q0VFX4 171 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 KLKP1Q107X0 134 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 KRTAP21-3Q3LHN1 58 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 FDCSPQ8NFU4 85 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 CCDC140Q96MF4 163 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 SNURFQ9Y675 71 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 TLN1Q9Y490 2541 aaKnown RBP1.66□□□□□ -2.14
USP53-202ENST00000450251 BPTFQ12830 3046 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGKV1OR2-108A0A075B7D4 117 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 K7EQD1 137 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 COX6B1P14854 86 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.66□□□□□ -2.14
USP53-202ENST00000450251 C7orf65Q6ZTY9 151 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 LCA10Q71F78 164 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 FGF23Q9GZV9 251 aaPredicted RBP1.66□□□□□ -2.14
USP53-202ENST00000450251 LTBP2Q14767 1821 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 DOCK11Q5JSL3 2073 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 RALGAPA1Q6GYQ0 2036 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGLV2-18A0A075B6J9 118 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGKV3OR2-268A0A0C4DH90 116 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGHV7-4-1A0A0J9YVY3 117 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGLV1-44P01699 117 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 SPINK2P20155 84 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 COX7BP24311 80 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 VMO1Q7Z5L0 202 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 WFDC10AQ9H1F0 79 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 IGIPA6NJ69 53 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 CCL24O00175 119 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 FREM3P0C091 2139 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 Q9HAA7 133 aa1.66□□□□□ -2.14
USP53-202ENST00000450251 TANC2Q9HCD6 1990 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 LOC110117498A0A087WWA1 95 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 K7ERS5 55 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 NCR3O14931 201 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 LHBP01229 141 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 LINC01561Q8N1V8 128 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 LINC00467Q9BRT7 94 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 MSRB1Q9NZV6 116 aa1.65□□□□□ -2.14
USP53-202ENST00000450251 IGKV3-7A0A075B6H7 116 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 IGKV1-17P01599 117 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 RFPL3SP0C7P2 107 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 CRIP2P52943 208 aaPredicted RBP1.65□□□□□ -2.15
USP53-202ENST00000450251 RPL39P62891 51 aaKnown RBP1.65□□□□□ -2.15
USP53-202ENST00000450251 NDPQ00604 133 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 RSPO4Q2I0M5 234 aaPredicted RBP1.65□□□□□ -2.15
USP53-202ENST00000450251 ATP11AUNQ6ZP68 121 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 LINC00482Q8N8I6 264 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 RHPN1-AS1Q9BWJ2 59 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 SPRR3Q9UBC9 169 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 BAHCC1Q9P281 2608 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 MUC22E2RYF6 1773 aaPredicted RBP1.65□□□□□ -2.15
USP53-202ENST00000450251 MYO18BQ8IUG5 2567 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 K7EMT4 169 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 SPRY2O43597 315 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 SPAG11BQ08648 103 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 MIR7-3HGQ8N6C7 128 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 DOPEY1Q5JWR5 2465 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 IGLV3-9A0A075B6K5 115 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 A0A087WZ39 114 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 APOC4P55056 127 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 LINC00269Q8N2A0 174 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 C17orf77Q96MU5 243 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 HEATR5BQ9P2D3 2071 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 BRI3O95415 125 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 FSTL3O95633 263 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 ELOF1P60002 83 aaKnown RBP1.65□□□□□ -2.15
USP53-202ENST00000450251 Q6ZPA2 131 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 Q6ZS46 218 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 RMI2Q96E14 147 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms