RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
SNHG17-207ENST00000449469 PTH2Q96A98 100 aa12.45□□□□□ -0.42
SNHG17-207ENST00000449469 VPREB3Q9UKI3 123 aa12.45□□□□□ -0.42
SNHG17-207ENST00000449469 IGLV4-3A0A075B6K6 122 aa12.44□□□□□ -0.42
SNHG17-207ENST00000449469 ZNF22P17026 224 aaPredicted RBP12.44□□□□□ -0.42
SNHG17-207ENST00000449469 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.44□□□□□ -0.42
SNHG17-207ENST00000449469 IGKV3-20P01619 116 aa12.44□□□□□ -0.42
SNHG17-207ENST00000449469 Q5PR19 223 aa12.44□□□□□ -0.42
SNHG17-207ENST00000449469 HOXD3P31249 432 aaPredicted RBP12.43□□□□□ -0.42
SNHG17-207ENST00000449469 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
SNHG17-207ENST00000449469 TEN1Q86WV5 123 aa12.43□□□□□ -0.42
SNHG17-207ENST00000449469 PPDPFLQ8WWR9 84 aa12.43□□□□□ -0.42
SNHG17-207ENST00000449469 A8MWV9 139 aa12.43□□□□□ -0.42
SNHG17-207ENST00000449469 MTURNQ8N3F0 131 aa12.43□□□□□ -0.42
SNHG17-207ENST00000449469 AKAP6Q13023 2319 aa12.42□□□□□ -0.42
SNHG17-207ENST00000449469 SMAGPQ0VAQ4 97 aa12.41□□□□□ -0.42
SNHG17-207ENST00000449469 TCL1BO95988 128 aa12.41□□□□□ -0.42
SNHG17-207ENST00000449469 MRPS36P82909 103 aaKnown RBP12.41□□□□□ -0.42
SNHG17-207ENST00000449469 C10orf99Q6UWK7 81 aa12.4□□□□□ -0.42
SNHG17-207ENST00000449469 SPANXA1Q9NS26 97 aa12.4□□□□□ -0.43
SNHG17-207ENST00000449469 A4D1N5 150 aa12.39□□□□□ -0.43
SNHG17-207ENST00000449469 M0R2P5 195 aa12.39□□□□□ -0.43
SNHG17-207ENST00000449469 SCGB1C2P0DMR2 95 aa12.39□□□□□ -0.43
SNHG17-207ENST00000449469 CD28P10747 220 aa12.39□□□□□ -0.43
SNHG17-207ENST00000449469 INSL3P51460 131 aa12.39□□□□□ -0.43
SNHG17-207ENST00000449469 LINC00467Q9BRT7 94 aa12.39□□□□□ -0.43
SNHG17-207ENST00000449469 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
SNHG17-207ENST00000449469 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
SNHG17-207ENST00000449469 A0A096LNT2 108 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 ZNF415Q09FC8 603 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 Q6YL49 198 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 ZNF418Q8TF45 676 aaPredicted RBP12.38□□□□□ -0.43
SNHG17-207ENST00000449469 DEFB104AQ8WTQ1 72 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
SNHG17-207ENST00000449469 OPRPNQ99935 248 aaPredicted RBP12.38□□□□□ -0.43
SNHG17-207ENST00000449469 ERG28Q9UKR5 140 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 TNFRSF18Q9Y5U5 241 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 A0A0J9YXV3 536 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 A0A1B0GV72 72 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 CIDEAO60543 219 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 FSHBP01225 129 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 TIMM21Q9BVV7 248 aa12.38□□□□□ -0.43
SNHG17-207ENST00000449469 ASH1LQ9NR48 2969 aaKnown RBP12.37□□□□□ -0.43
SNHG17-207ENST00000449469 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
SNHG17-207ENST00000449469 DUX5Q96PT3 197 aa12.37□□□□□ -0.43
SNHG17-207ENST00000449469 PEMTQ9UBM1 199 aa12.37□□□□□ -0.43
SNHG17-207ENST00000449469 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.435e-9■■■■□ 23.7
SNHG17-207ENST00000449469 H3BMM0 161 aa12.36□□□□□ -0.43
SNHG17-207ENST00000449469 A0A0J9YXY3 114 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 TINCRA0A1B0GVN0 87 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 IGHV1-58A0A0C4DH39 117 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 TGFAP01135 160 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 RBMY1A1P0DJD3 496 aaKnown RBP12.35□□□□□ -0.43
SNHG17-207ENST00000449469 RBMY1CP0DJD4 496 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 RBMY1FQ15415 496 aaKnown RBP12.35□□□□□ -0.43
SNHG17-207ENST00000449469 SFTA2Q6UW10 78 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 MUSTN1Q8IVN3 82 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 RNF183Q96D59 192 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 LINC01600Q96MT4 127 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 SPXQ9BT56 116 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 SPANXDQ9BXN6 97 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 SPANXCQ9NY87 97 aa12.35□□□□□ -0.43
SNHG17-207ENST00000449469 TMEM262E9PQX1 116 aa12.34□□□□□ -0.43
SNHG17-207ENST00000449469 DEFB131AP59861 70 aa12.34□□□□□ -0.43
SNHG17-207ENST00000449469 DUX3Q96PT4 197 aa12.34□□□□□ -0.43
SNHG17-207ENST00000449469 Q8N2B8 174 aa12.34□□□□□ -0.43
SNHG17-207ENST00000449469 CDIP1Q9H305 208 aa12.34□□□□□ -0.43
SNHG17-207ENST00000449469 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
SNHG17-207ENST00000449469 ATXN8Q156A1 80 aa12.32□□□□□ -0.44
SNHG17-207ENST00000449469 TRBV30A0A0K0K1B3 111 aa12.32□□□□□ -0.44
SNHG17-207ENST00000449469 SLC25A20O43772 301 aa12.32□□□□□ -0.44
SNHG17-207ENST00000449469 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
SNHG17-207ENST00000449469 TIMM17BO60830 172 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 RAX2Q96IS3 184 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 CARD19Q96LW7 228 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 UBE2D4Q9Y2X8 147 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 IGHV3-64A0A075B6Q5 118 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 IGHV3-53P01767 116 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 BEAN1Q3B7T3 259 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 ANKRD29Q8N6D5 301 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 C4orf3Q8WVX3 66 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 LITAFQ99732 161 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 CHCHD7Q9BUK0 85 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 YAE1D1Q9NRH1 226 aa12.31□□□□□ -0.44
SNHG17-207ENST00000449469 NDUFA12Q9UI09 145 aa12.3□□□□□ -0.44
SNHG17-207ENST00000449469 EIF4EBP3O60516 100 aaPredicted RBP12.29□□□□□ -0.44
SNHG17-207ENST00000449469 Q1RN00 199 aa12.29□□□□□ -0.44
SNHG17-207ENST00000449469 RBMY1BA6NDE4 496 aaKnown RBP12.29□□□□□ -0.44
SNHG17-207ENST00000449469 RBMY1EA6NEQ0 496 aaKnown RBP12.29□□□□□ -0.44
SNHG17-207ENST00000449469 INSP01308 110 aa12.29□□□□□ -0.44
SNHG17-207ENST00000449469 RBMY1DP0C7P1 496 aaKnown RBP12.29□□□□□ -0.44
SNHG17-207ENST00000449469 SLURP1P55000 103 aa12.29□□□□□ -0.44
SNHG17-207ENST00000449469 IFITM1P13164 125 aa12.28□□□□□ -0.44
SNHG17-207ENST00000449469 MIAQ16674 131 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms