RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 TENM1Q9UKZ4 2725 aa11.78□□□□□ -0.52
AP000253.1-201ENST00000449339 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.53
AP000253.1-201ENST00000449339 M0QY20 66 aa11.77□□□□□ -0.53
AP000253.1-201ENST00000449339 VCYO14598 125 aa11.77□□□□□ -0.53
AP000253.1-201ENST00000449339 C12orf54Q6X4T0 127 aa11.76□□□□□ -0.53
AP000253.1-201ENST00000449339 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
AP000253.1-201ENST00000449339 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
AP000253.1-201ENST00000449339 NDUFA11Q86Y39 141 aa11.76□□□□□ -0.53
AP000253.1-201ENST00000449339 TRAV12-1A0A0B4J245 112 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 BVES-AS1Q5T3Y7 98 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 PCP2Q8IVA1 136 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 OR11H12B2RN74 326 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 ZC2HC1BQ5TFG8 222 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 MORN3Q6PF18 240 aaPredicted RBP11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 ZFP2Q6ZN57 461 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 ERASQ7Z444 233 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 DEFB104AQ8WTQ1 72 aa11.75□□□□□ -0.53
AP000253.1-201ENST00000449339 CCL25O15444 150 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 INSP01308 110 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 IGLV1-51P01701 117 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 PLNP26678 52 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 LINC01587Q99440 93 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 VWFP04275 2813 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 IGKV2D-26A0A0A0MRZ7 120 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 H7C1H1 209 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 TRPT1Q86TN4 253 aaKnown RBP11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 GTSCR1Q86UQ5 136 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 STHQ8IWL8 128 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 CLUHP3Q96NS8 147 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 WFDC10AQ9H1F0 79 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 CYSLTR1Q9Y271 337 aa11.74□□□□□ -0.53
AP000253.1-201ENST00000449339 F8VRH5 84 aa11.73□□□□□ -0.53
AP000253.1-201ENST00000449339 PTTG1IPP53801 180 aa11.73□□□□□ -0.53
AP000253.1-201ENST00000449339 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
AP000253.1-201ENST00000449339 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
AP000253.1-201ENST00000449339 PF4P02776 101 aa11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 ZNF415Q09FC8 603 aa11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 XCL2Q9UBD3 114 aa11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 M0R2P5 195 aa11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 LINC00467Q9BRT7 94 aa11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 CHTOPQ9Y3Y2 248 aaKnown RBP11.72□□□□□ -0.53
AP000253.1-201ENST00000449339 ATRQ13535 2644 aa11.71□□□□□ -0.53
AP000253.1-201ENST00000449339 SPATA3Q8NHX4 192 aa11.71□□□□□ -0.53
AP000253.1-201ENST00000449339 NOTCH3Q9UM47 2321 aa11.71□□□□□ -0.54
AP000253.1-201ENST00000449339 LINC01549A6NIU2 74 aa11.71□□□□□ -0.54
AP000253.1-201ENST00000449339 SIVA1O15304 175 aa11.71□□□□□ -0.54
AP000253.1-201ENST00000449339 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.54
AP000253.1-201ENST00000449339 C11orf72Q8NBR9 251 aa11.71□□□□□ -0.54
AP000253.1-201ENST00000449339 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 PIK3CD-AS1Q5SR53 167 aa11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 IGIPA6NJ69 53 aa11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 A8MWV9 139 aa11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 RIPPLY3P57055 190 aa11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 Q6ZVH6 145 aa11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 TTTY13Q9BZ97 58 aa11.7□□□□□ -0.54
AP000253.1-201ENST00000449339 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
AP000253.1-201ENST00000449339 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
AP000253.1-201ENST00000449339 TEP1Q99973 2627 aaKnown RBP11.69□□□□□ -0.54
AP000253.1-201ENST00000449339 TMEM238LA0A1B0GVL6 79 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 TSHBP01222 138 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 UFSP1Q6NVU6 142 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 PTH2Q96A98 100 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 EDA2RQ9HAV5 297 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 C19orf73Q9NVV2 129 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 COX11Q9Y6N1 276 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 BEAN1Q3B7T3 259 aa11.68□□□□□ -0.54
AP000253.1-201ENST00000449339 IGHV3OR16-12A0A075B7B8 117 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 SPXQ9BT56 116 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 I3L3M4 83 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 RHOHQ15669 191 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 C1orf158Q8N1D5 194 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 TMEM141Q96I45 108 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 TIMM17AQ99595 171 aa11.67□□□□□ -0.54
AP000253.1-201ENST00000449339 P0DMU3 169 aa11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 FAM231AP0DMU4 169 aa11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 FAM231CP0DMU5 169 aa11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 HSD52Q0P140 79 aa11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 RPL35AP18077 110 aaKnown RBP11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 AZU1P20160 251 aa11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 CMC4P56277 68 aaPredicted RBP11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 MRPL16Q9NX20 251 aaKnown RBP11.66□□□□□ -0.54
AP000253.1-201ENST00000449339 BAHCC1Q9P281 2608 aa11.65□□□□□ -0.54
AP000253.1-201ENST00000449339 TRAV8-6A0A0B4J262 113 aa11.65□□□□□ -0.54
AP000253.1-201ENST00000449339 TAX1BP3O14907 124 aa11.64□□□□□ -0.55
AP000253.1-201ENST00000449339 SEC11AP67812 179 aa11.64□□□□□ -0.55
AP000253.1-201ENST00000449339 PMVKQ15126 192 aa11.64□□□□□ -0.55
AP000253.1-201ENST00000449339 TRBV25-1A0A075B6N4 114 aa11.64□□□□□ -0.55
AP000253.1-201ENST00000449339 GIG44P09565 113 aaPredicted RBP11.64□□□□□ -0.55
AP000253.1-201ENST00000449339 HIGD1BQ9P298 99 aa11.64□□□□□ -0.55
AP000253.1-201ENST00000449339 NACAE9PAV3 2078 aa11.64□□□□□ -0.55
AP000253.1-201ENST00000449339 CYSRT1A8MQ03 144 aa11.63□□□□□ -0.55
AP000253.1-201ENST00000449339 RHODO00212 210 aa11.63□□□□□ -0.55
AP000253.1-201ENST00000449339 Q6ZSN1 163 aa11.63□□□□□ -0.55
AP000253.1-201ENST00000449339 C20orf203Q8NBC4 194 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms