RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
LMNA-208ENST00000448611 PRSS1P07477 247 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 ODF1Q14990 250 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 DKK2Q9UBU2 259 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 IGHV3-73A0A0B4J1V6 119 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 C2orf66Q6UXQ4 117 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 CSNK1G2-AS1Q8NCQ2 148 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 KIR2DL4Q99706 377 aa12.8□□□□□ -0.36
LMNA-208ENST00000448611 ZFP2Q6ZN57 461 aa12.79□□□□□ -0.36
LMNA-208ENST00000448611 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
LMNA-208ENST00000448611 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
LMNA-208ENST00000448611 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
LMNA-208ENST00000448611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.78□□□□□ -0.36
LMNA-208ENST00000448611 H7C1H1 209 aa12.78□□□□□ -0.36
LMNA-208ENST00000448611 SCGB3A1Q96QR1 104 aa12.78□□□□□ -0.36
LMNA-208ENST00000448611 RS1O15537 224 aa12.78□□□□□ -0.36
LMNA-208ENST00000448611 Q6ZN92 141 aa12.78□□□□□ -0.36
LMNA-208ENST00000448611 RHODO00212 210 aa12.77□□□□□ -0.37
LMNA-208ENST00000448611 Q6ZSN1 163 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 SNHG12Q9BXW3 62 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 TENM1Q9UKZ4 2725 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 EREGO14944 169 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 G0S2P27469 103 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 RIPPLY3P57055 190 aa12.76□□□□□ -0.37
LMNA-208ENST00000448611 P0DMU3 169 aa12.75□□□□□ -0.37
LMNA-208ENST00000448611 FAM231AP0DMU4 169 aa12.75□□□□□ -0.37
LMNA-208ENST00000448611 FAM231CP0DMU5 169 aa12.75□□□□□ -0.37
LMNA-208ENST00000448611 ANKRD39Q53RE8 183 aa12.75□□□□□ -0.37
LMNA-208ENST00000448611 ERASQ7Z444 233 aa12.75□□□□□ -0.37
LMNA-208ENST00000448611 CYSLTR1Q9Y271 337 aa12.75□□□□□ -0.37
LMNA-208ENST00000448611 A0A087WX48 190 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 HNRNPA3P51991 378 aaKnown RBP12.74□□□□□ -0.37
LMNA-208ENST00000448611 C12orf54Q6X4T0 127 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 MRPL52Q86TS9 123 aaKnown RBP12.74□□□□□ -0.37
LMNA-208ENST00000448611 STPG4Q8N801 248 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 TRGV1A0A0A0MS02 117 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 TRAV12-1A0A0B4J245 112 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 LINC01549A6NIU2 74 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 I3L3M4 83 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 M0R143 59 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 TSHBP01222 138 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 IGHV3-53P01767 116 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 C16orf74Q96GX8 76 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 TP73-AS1Q9UF72 201 aa12.74□□□□□ -0.37
LMNA-208ENST00000448611 VWFP04275 2813 aa12.73□□□□□ -0.37
LMNA-208ENST00000448611 IGKCP01834 107 aa12.73□□□□□ -0.37
LMNA-208ENST00000448611 DAZ2Q13117 558 aaKnown RBP12.73□□□□□ -0.37
LMNA-208ENST00000448611 RHOHQ15669 191 aa12.73□□□□□ -0.37
LMNA-208ENST00000448611 WFDC9Q8NEX5 89 aa12.73□□□□□ -0.37
LMNA-208ENST00000448611 MRPL35Q9NZE8 188 aaKnown RBP12.73□□□□□ -0.37
LMNA-208ENST00000448611 HHLA3Q9XRX5 114 aa12.73□□□□□ -0.37
LMNA-208ENST00000448611 COL6A5A8TX70 2615 aa12.73□□□□□ -0.37
LMNA-208ENST00000448611 IGIPA6NJ69 53 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 Q6ZTI0 123 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 BAALCQ8WXS3 180 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 MDFIQ99750 246 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 Q9UF83 564 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 DPM2O94777 84 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 RPL39P62891 51 aaKnown RBP12.72□□□□□ -0.37
LMNA-208ENST00000448611 LBHQ53QV2 105 aaPredicted RBP12.72□□□□□ -0.37
LMNA-208ENST00000448611 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 MRPS16Q9Y3D3 137 aaKnown RBP12.72□□□□□ -0.37
LMNA-208ENST00000448611 TNFRSF18Q9Y5U5 241 aa12.72□□□□□ -0.37
LMNA-208ENST00000448611 COX8AP10176 69 aa12.71□□□□□ -0.37
LMNA-208ENST00000448611 OR4C5Q8NGB2 326 aa12.71□□□□□ -0.37
LMNA-208ENST00000448611 C2orf88Q9BSF0 95 aa12.71□□□□□ -0.37
LMNA-208ENST00000448611 NOP10Q9NPE3 64 aaKnown RBP12.71□□□□□ -0.37
LMNA-208ENST00000448611 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
LMNA-208ENST00000448611 TIMM17AQ99595 171 aa12.7□□□□□ -0.38
LMNA-208ENST00000448611 F8VRH5 84 aa12.69□□□□□ -0.38
LMNA-208ENST00000448611 ZNF479Q96JC4 524 aa12.69□□□□□ -0.38
LMNA-208ENST00000448611 DNAJC30Q96LL9 226 aa12.69□□□□□ -0.38
LMNA-208ENST00000448611 OVOL2Q9BRP0 275 aa12.69□□□□□ -0.38
LMNA-208ENST00000448611 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
LMNA-208ENST00000448611 WIPF1O43516 503 aa12.68□□□□□ -0.38
LMNA-208ENST00000448611 FGF6P10767 208 aa12.68□□□□□ -0.38
LMNA-208ENST00000448611 TMEM141Q96I45 108 aa12.68□□□□□ -0.38
LMNA-208ENST00000448611 PLNP26678 52 aa12.68□□□□□ -0.38
LMNA-208ENST00000448611 C20orf203Q8NBC4 194 aa12.68□□□□□ -0.38
LMNA-208ENST00000448611 CHTOPQ9Y3Y2 248 aaKnown RBP12.68□□□□□ -0.38
LMNA-208ENST00000448611 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
LMNA-208ENST00000448611 TCTAP57738 103 aa12.67□□□□□ -0.38
LMNA-208ENST00000448611 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
LMNA-208ENST00000448611 ZC2HC1BQ5TFG8 222 aa12.66□□□□□ -0.38
LMNA-208ENST00000448611 SHISA2Q6UWI4 295 aa12.66□□□□□ -0.38
LMNA-208ENST00000448611 BOD1L2Q8IYS8 172 aa12.66□□□□□ -0.38
LMNA-208ENST00000448611 NOTCH3Q9UM47 2321 aa12.65□□□□□ -0.38
LMNA-208ENST00000448611 IGKV2D-26A0A0A0MRZ7 120 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 GAGE12BA1L429 117 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 GAGE7O76087 117 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 GAGE12FP0CL80 117 aa12.64□□□□□ -0.39
LMNA-208ENST00000448611 GAGE12GP0CL81 117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms