RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
SHC1-210ENST00000448116 MYO18BQ8IUG5 2567 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 IGLV4-69A0A075B6H9 119 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 IGIPA6NJ69 53 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 Q8N1Y9 231 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 CENPEQ02224 2701 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 IGHV4OR15-8A0A075B7B6 117 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 A0A087WW49 117 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
SHC1-210ENST00000448116 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
SHC1-210ENST00000448116 IGHV3-73A0A0B4J1V6 119 aa9.6□□□□□ -0.87
SHC1-210ENST00000448116 DEFB112Q30KQ8 113 aa9.6□□□□□ -0.87
SHC1-210ENST00000448116 SPATA25Q9BR10 227 aa9.6□□□□□ -0.87
SHC1-210ENST00000448116 FLNCQ14315 2725 aa9.6□□□□□ -0.87
SHC1-210ENST00000448116 CELSR2Q9HCU4 2923 aa9.6□□□□□ -0.87
SHC1-210ENST00000448116 COX6B1P14854 86 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 TSPEAR-AS2P59090 65 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 ZNRF2Q8NHG8 242 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 IGHV3-16A0A0C4DH30 117 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 K7EMT4 169 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 NXPH4O95158 308 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 ZNF876PQ49A33 203 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 CRYBG3Q68DQ2 2970 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 B4DSR2 109 aa9.59□□□□□ -0.87
SHC1-210ENST00000448116 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
SHC1-210ENST00000448116 A0A0J9YY99 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 A0A0J9YX75 114 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 GAGE12JA6NER3 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 LINC01619G3V211 115 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 H7C2G1 150 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 GAGE7O76087 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 SCGB1C2P0DMR2 95 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 GAGE4Q13068 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 IGHV1OR15-1A0A075B7D0 117 aa9.58□□□□□ -0.88
SHC1-210ENST00000448116 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
SHC1-210ENST00000448116 PRORYQ9H606 182 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 MYO9AB2RTY4 2548 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 J3QQQ9 107 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 PSMB8P28062 276 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 DOPEY1Q5JWR5 2465 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 M0QY20 66 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 PRM2P04554 102 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 XGP55808 180 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 CFHR3Q02985 330 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 POM121L12Q8N7R1 296 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 TIMM17AQ99595 171 aa9.57□□□□□ -0.88
SHC1-210ENST00000448116 CFAP46Q8IYW2 2715 aa9.56□□□□□ -0.88
SHC1-210ENST00000448116 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
SHC1-210ENST00000448116 PRO0461Q9UI25 63 aa9.56□□□□□ -0.88
SHC1-210ENST00000448116 KNCNA6PVL3 124 aa9.56□□□□□ -0.88
SHC1-210ENST00000448116 LGALS9O00182 355 aa9.56□□□□□ -0.88
SHC1-210ENST00000448116 NHLRC4P0CG21 123 aaPredicted RBP9.55□□□□□ -0.88
SHC1-210ENST00000448116 UBE2D1P51668 147 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 C9orf85Q96MD7 179 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 UTP20O75691 2785 aaKnown RBP9.55□□□□□ -0.88
SHC1-210ENST00000448116 ZANQ9Y493 2812 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 TRAV2A0A0B4J234 112 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 P0DMU3 169 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 FAM231AP0DMU4 169 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 FAM231CP0DMU5 169 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 SEC61GP60059 68 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 NDUFA11Q86Y39 141 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 A0A0J9YXV3 536 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 K7EQG2 157 aa9.55□□□□□ -0.88
SHC1-210ENST00000448116 RNASE13Q5GAN3 156 aaKnown RBP9.54□□□□□ -0.88
SHC1-210ENST00000448116 TRPT1Q86TN4 253 aaKnown RBP9.54□□□□□ -0.88
SHC1-210ENST00000448116 A0A1W2PRX2 142 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 ADARB2-AS1A8MUL3 147 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 F8WDY8 70 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 PROK1P58294 105 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 NACAE9PAV3 2078 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 CFC1P0CG37 223 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 DEFB136Q30KP8 78 aa9.54□□□□□ -0.88
SHC1-210ENST00000448116 TRBV6-5A0A0K0K1A5 114 aa9.53□□□□□ -0.88
SHC1-210ENST00000448116 IGHV3-30P01768 117 aa9.53□□□□□ -0.88
SHC1-210ENST00000448116 IGHV3-30-5P0DP03 117 aa9.53□□□□□ -0.88
SHC1-210ENST00000448116 HOXD3P31249 432 aaPredicted RBP9.53□□□□□ -0.88
SHC1-210ENST00000448116 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
SHC1-210ENST00000448116 CEMP1Q6PRD7 247 aaPredicted RBP9.53□□□□□ -0.88
SHC1-210ENST00000448116 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
SHC1-210ENST00000448116 ZNF580Q9UK33 172 aa9.53□□□□□ -0.88
SHC1-210ENST00000448116 PTPN13Q12923 2485 aa9.53□□□□□ -0.88
SHC1-210ENST00000448116 EPG5Q9HCE0 2579 aa9.53□□□□□ -0.88
SHC1-210ENST00000448116 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.88
SHC1-210ENST00000448116 I3L3M4 83 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 DEFB131AP59861 70 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 KHDC1LQ5JSQ8 128 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 CFAP126Q5VTH2 177 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 HIST2H2BDQ6DRA6 164 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 C20orf203Q8NBC4 194 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 BEX4Q9NWD9 120 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms