RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 MYMXA0A1B0GTQ4 84 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 WI2-2373I1.2A0A1W2PRP0 233 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 OVOL1O14753 267 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 TNFRSF6BO95407 300 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 IGLV1-40P01703 118 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 MRGPRG-AS1Q2M3A8 158 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 PRIMA1Q86XR5 153 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 NDUFA11Q86Y39 141 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 Q8N2B8 174 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 C10orf126Q8N4M7 172 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 CHCHD5Q9BSY4 110 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 HHLA3Q9XRX5 114 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 CELSR1Q9NYQ6 3014 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 SLC25A20O43772 301 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 SH2D1AO60880 128 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 TRBV12-3P01733 135 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 ZNF56Q15929 161 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 C4orf3Q8WVX3 66 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 TRGV9Q99603 122 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 MORN3Q6PF18 240 aaPredicted RBP4.51□□□□□ -1.69
PROM1-201ENST00000447510 C18orf65Q6ZTR6 163 aa4.51□□□□□ -1.69
PROM1-201ENST00000447510 TRPT1Q86TN4 253 aaKnown RBP4.51□□□□□ -1.69
PROM1-201ENST00000447510 NHLRC4P0CG21 123 aaPredicted RBP4.5□□□□□ -1.69
PROM1-201ENST00000447510 HERVK_113P61574 105 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 VCX2Q9H322 139 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 TNFRSF18Q9Y5U5 241 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 TRAV2A0A0B4J234 112 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 MYCNOSP40205 109 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 CRIP2P52943 208 aaPredicted RBP4.5□□□□□ -1.69
PROM1-201ENST00000447510 SLC25A39Q9BZJ4 359 aaPredicted RBP4.5□□□□□ -1.69
PROM1-201ENST00000447510 DAZ1Q9NQZ3 744 aaKnown RBP4.5□□□□□ -1.69
PROM1-201ENST00000447510 LOC107984640A0A0U1RRK4 108 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 NDUFA4O00483 81 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 CTSGP08311 255 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 ATP6V0E2Q8NHE4 81 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 PRADC1Q9BSG0 188 aa4.5□□□□□ -1.69
PROM1-201ENST00000447510 NXT2Q9NPJ8 142 aaKnown RBP4.5□□□□□ -1.69
PROM1-201ENST00000447510 IGKV1D-37A0A075B6S9 117 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 RHODO00212 210 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 C9orf153Q5TBE3 101 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 CCDC140Q96MF4 163 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 ZNF580Q9UK33 172 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 IGHV3-64A0A075B6Q5 118 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 SPRY2O43597 315 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 GP9P14770 177 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 CRIP1P50238 77 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 TMEM170BQ5T4T1 132 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 RHPN1-AS1Q9BWJ2 59 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 IGKV1-17P01599 117 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 TAL2Q16559 108 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 SPANXN1Q5VSR9 72 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 PLEKHB2Q96CS7 222 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 STAB1Q9NY15 2570 aa4.49□□□□□ -1.69
PROM1-201ENST00000447510 MXRA5Q9NR99 2828 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 TEX49A0A1B0GTD5 131 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 PRSS2P07478 247 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 C16orf92Q96LL3 132 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 MGPP08493 103 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 CFHR3Q02985 330 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 LAGE3Q14657 143 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 TRBV7-3A0A075B6L6 115 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 PSMG4Q5JS54 123 aa4.48□□□□□ -1.69
PROM1-201ENST00000447510 H7C1H1 209 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 LINC00694P0DN24 101 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 PLNP26678 52 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 GPHB5Q86YW7 130 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 OR10J6PQ8NGY7 276 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 TMEM190Q8WZ59 177 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 NF1P21359 2839 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 A0A087WX48 190 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 IGLV2-11P01706 119 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 UNQ9165/PRO28630Q6UXU0 137 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 Q8N1Y9 231 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 EDA2RQ9HAV5 297 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 ZNF256Q9Y2P7 627 aaPredicted RBP4.47□□□□□ -1.69
PROM1-201ENST00000447510 KLK5Q9Y337 293 aaPredicted RBP4.47□□□□□ -1.69
PROM1-201ENST00000447510 SIGLEC15Q6ZMC9 328 aa4.47□□□□□ -1.69
PROM1-201ENST00000447510 IGHV7-4-1A0A0J9YVY3 117 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 F8VRH5 84 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 M0R381 172 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 RS1O15537 224 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 HLA-DMBP28068 263 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 NPC2P61916 151 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 PMVKQ15126 192 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 C9orf66Q5T8R8 295 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 C2orf82Q6UX34 121 aa4.46□□□□□ -1.69
PROM1-201ENST00000447510 NACAE9PAV3 2078 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 TRBV19A0A075B6N1 114 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 TRAV12-3A0A0B4J271 114 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 CD7P09564 240 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 RPL13AP40429 203 aaKnown RBP4.46□□□□□ -1.7
PROM1-201ENST00000447510 SNRPD3P62318 126 aaKnown RBP4.46□□□□□ -1.7
PROM1-201ENST00000447510 C19orf54Q5BKX5 351 aa4.46□□□□□ -1.7
PROM1-201ENST00000447510 S100A4P26447 101 aaKnown RBP4.46□□□□□ -1.7
PROM1-201ENST00000447510 ERCC8Q13216 396 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms