RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 TBPP20226 339 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 SDC2P34741 201 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 RRAS2P62070 204 aaPredicted RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 RNASE10Q5GAN6 216 aaKnown RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 FAM74A4Q5TZK3 123 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 AQP10Q96PS8 301 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 OPRPNQ99935 248 aaPredicted RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 TRBV6-1A0A0K0K1D8 114 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 CD3DP04234 171 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 SLC25A6P12236 298 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 ZNF80P51504 273 aaPredicted RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 ZFP69Q49AA0 526 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 C12orf45Q8N5I9 185 aaPredicted RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 NUP35Q8NFH5 326 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 OR1L4Q8NGR5 311 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 CHCHD10Q8WYQ3 142 aaPredicted RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 PHYHIPLQ96FC7 376 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 SFRP2Q96HF1 295 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 PFDN5Q99471 154 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
PMS1-215ENST00000447232 SLIRPQ9GZT3 109 aaKnown RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 C14orf166Q9Y224 244 aaKnown RBP1.74□□□□□ -2.13
PMS1-215ENST00000447232 IGHV1-58A0A0C4DH39 117 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 NBEAP1P0C6P0 100 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 CSN1S1P47710 185 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 SULT1A2P50226 295 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 UBE2NLQ5JXB2 153 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 MIC13Q5XKP0 118 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 TMEM14EPQ6UXP3 125 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 Q6ZRG5 221 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 DAND5Q8N907 189 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 FAM167A-AS1Q96KT0 104 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 DERL1Q9BUN8 251 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 SLC25A2Q9BXI2 301 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 GPR132Q9UNW8 380 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 PAM16Q9Y3D7 125 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 IGHV1-24A0A0C4DH33 117 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 CAMPP49913 170 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 RPL18AQ02543 176 aaKnown RBP1.73□□□□□ -2.13
PMS1-215ENST00000447232 MXD1Q05195 221 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 SPAG11AQ6PDA7 123 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 FXYD5Q96DB9 178 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 BCL7BQ9BQE9 202 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 MED28Q9H204 178 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 TREM1Q9NP99 234 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 SCN3BQ9NY72 215 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 IL36BQ9NZH7 164 aa1.73□□□□□ -2.13
PMS1-215ENST00000447232 CCDC59Q9P031 241 aaKnown RBP1.73□□□□□ -2.13
PMS1-215ENST00000447232 IGLV4-69A0A075B6H9 119 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 IGKV3D-20A0A0C4DH25 116 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 CAMLGP49069 296 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 UBE2BP63146 152 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 SCGB2B2Q4G0G5 96 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.72□□□□□ -2.13
PMS1-215ENST00000447232 DYNC2LI1Q8TCX1 351 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 ISOC2Q96AB3 205 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 OR5AC2Q9NZP5 309 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 RABL2AQ9UBK7 228 aaPredicted RBP1.72□□□□□ -2.13
PMS1-215ENST00000447232 RABL2BQ9UNT1 228 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 FLVCR2Q9UPI3 526 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 KCNIP3Q9Y2W7 256 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 NUPR1O60356 82 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 METTL15P1P0C7V9 234 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 RAB4BP61018 213 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 GNGT1P63211 74 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 FAM19A5Q7Z5A7 132 aaPredicted RBP1.72□□□□□ -2.13
PMS1-215ENST00000447232 SDHCQ99643 169 aaPredicted RBP1.72□□□□□ -2.13
PMS1-215ENST00000447232 GGACTQ9BVM4 153 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 PSG8Q9UQ74 426 aa1.72□□□□□ -2.13
PMS1-215ENST00000447232 IGKV2D-26A0A0A0MRZ7 120 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 M0QXV9 152 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 CIB2O75838 187 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 RPL29P47914 159 aaKnown RBP1.71□□□□□ -2.14
PMS1-215ENST00000447232 TAS2R19P59542 299 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 RANP62826 216 aaKnown RBP1.71□□□□□ -2.14
PMS1-215ENST00000447232 DNLZQ5SXM8 178 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 NRARPQ7Z6K4 114 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 SNX29P2Q8IUI4 249 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 PACRGLQ8N7B6 248 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 SAMD12Q8N8I0 201 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 SMIM8Q96KF7 97 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 CTDSP1Q9GZU7 261 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 PSENENQ9NZ42 101 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 UBE2D4Q9Y2X8 147 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 TPRKBQ9Y3C4 175 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 IGKV3OR2-268A0A0C4DH90 116 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 C19orf71A6NCJ1 209 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 GCGP01275 180 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 ESDP10768 282 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 S100A4P26447 101 aaKnown RBP1.71□□□□□ -2.14
PMS1-215ENST00000447232 RPL28P46779 137 aaKnown RBP1.71□□□□□ -2.14
PMS1-215ENST00000447232 OR11H4Q8NGC9 324 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 OR5C1Q8NGR4 320 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 TMEM243Q9BU79 118 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 S100A14Q9HCY8 104 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 MTFP1Q9UDX5 166 aa1.71□□□□□ -2.14
PMS1-215ENST00000447232 PIGBOS1A0A0B4J2F0 54 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 H3BVH4 76 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 RAB3DO95716 219 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 GCSAMLQ5JQS6 135 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms