RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 AZU1P20160 251 aa12.68□□□□□ -0.38
SMC6-206ENST00000446852 NUTF2P61970 127 aaKnown RBP12.68□□□□□ -0.38
SMC6-206ENST00000446852 UFSP1Q6NVU6 142 aa12.68□□□□□ -0.38
SMC6-206ENST00000446852 HINT1P49773 126 aaPredicted RBP12.67□□□□□ -0.38
SMC6-206ENST00000446852 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
SMC6-206ENST00000446852 IGHV3OR16-12A0A075B7B8 117 aa12.67□□□□□ -0.38
SMC6-206ENST00000446852 A0A087WX48 190 aa12.67□□□□□ -0.38
SMC6-206ENST00000446852 DPM2O94777 84 aa12.67□□□□□ -0.38
SMC6-206ENST00000446852 LURAP1LQ8IV03 231 aa12.67□□□□□ -0.38
SMC6-206ENST00000446852 KIR2DL4Q99706 377 aa12.67□□□□□ -0.38
SMC6-206ENST00000446852 PIK3CD-AS1Q5SR53 167 aa12.66□□□□□ -0.38
SMC6-206ENST00000446852 PTH2Q96A98 100 aa12.66□□□□□ -0.38
SMC6-206ENST00000446852 A8MWV9 139 aa12.66□□□□□ -0.38
SMC6-206ENST00000446852 LINC00482Q8N8I6 264 aa12.66□□□□□ -0.38
SMC6-206ENST00000446852 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
SMC6-206ENST00000446852 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
SMC6-206ENST00000446852 PF4P02776 101 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 GIG44P09565 113 aaPredicted RBP12.65□□□□□ -0.38
SMC6-206ENST00000446852 C2orf91Q6ZV80 131 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 ERASQ7Z444 233 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 NEXN-AS1Q8NBZ9 246 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 FAM110AQ9BQ89 295 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 TRAV12-1A0A0B4J245 112 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 P0DMU3 169 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 FAM231AP0DMU4 169 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 FAM231CP0DMU5 169 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 FOSL1P15407 271 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
SMC6-206ENST00000446852 RPL39P62891 51 aaKnown RBP12.65□□□□□ -0.38
SMC6-206ENST00000446852 CFAP126Q5VTH2 177 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 BAALCQ8WXS3 180 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 CYSLTR1Q9Y271 337 aa12.65□□□□□ -0.38
SMC6-206ENST00000446852 SPXQ9BT56 116 aa12.64□□□□□ -0.39
SMC6-206ENST00000446852 EDA2RQ9HAV5 297 aa12.64□□□□□ -0.39
SMC6-206ENST00000446852 FLNBO75369 2602 aaKnown RBP12.64□□□□□ -0.39
SMC6-206ENST00000446852 Q6ZSN1 163 aa12.64□□□□□ -0.39
SMC6-206ENST00000446852 BOD1L2Q8IYS8 172 aa12.64□□□□□ -0.39
SMC6-206ENST00000446852 IGKV2D-26A0A0A0MRZ7 120 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 NMUP48645 174 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 RIPPLY3P57055 190 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 MPV17L2Q567V2 206 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 IL17DQ8TAD2 202 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 ATRQ13535 2644 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 CRLF1O75462 422 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 TSHBP01222 138 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 COL5A1-AS1Q5SY13 56 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 ZC2HC1BQ5TFG8 222 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 Q9UF83 564 aa12.63□□□□□ -0.39
SMC6-206ENST00000446852 TEP1Q99973 2627 aaKnown RBP12.63□□□□□ -0.39
SMC6-206ENST00000446852 IGIPA6NJ69 53 aa12.62□□□□□ -0.39
SMC6-206ENST00000446852 F8VRH5 84 aa12.62□□□□□ -0.39
SMC6-206ENST00000446852 H7C1H1 209 aa12.62□□□□□ -0.39
SMC6-206ENST00000446852 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
SMC6-206ENST00000446852 GTSCR1Q86UQ5 136 aa12.62□□□□□ -0.39
SMC6-206ENST00000446852 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
SMC6-206ENST00000446852 PLNP26678 52 aa12.61□□□□□ -0.39
SMC6-206ENST00000446852 SPATA3Q8NHX4 192 aa12.61□□□□□ -0.39
SMC6-206ENST00000446852 CHTOPQ9Y3Y2 248 aaKnown RBP12.61□□□□□ -0.39
SMC6-206ENST00000446852 G0S2P27469 103 aa12.61□□□□□ -0.39
SMC6-206ENST00000446852 I3L3M4 83 aa12.6□□□□□ -0.39
SMC6-206ENST00000446852 PRSS29PA6NIE9 313 aa12.6□□□□□ -0.39
SMC6-206ENST00000446852 F8P00451 2351 aa12.59□□□□□ -0.39
SMC6-206ENST00000446852 RS1O15537 224 aa12.59□□□□□ -0.39
SMC6-206ENST00000446852 RHOHQ15669 191 aa12.59□□□□□ -0.39
SMC6-206ENST00000446852 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
SMC6-206ENST00000446852 LINC01549A6NIU2 74 aa12.59□□□□□ -0.39
SMC6-206ENST00000446852 TMEM263Q8WUH6 116 aaKnown RBP12.59□□□□□ -0.39
SMC6-206ENST00000446852 RHODO00212 210 aa12.58□□□□□ -0.4
SMC6-206ENST00000446852 DLEU1O43261 78 aa12.58□□□□□ -0.4
SMC6-206ENST00000446852 TIMM17AQ99595 171 aa12.58□□□□□ -0.4
SMC6-206ENST00000446852 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
SMC6-206ENST00000446852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.57□□□□□ -0.4
SMC6-206ENST00000446852 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
SMC6-206ENST00000446852 TRGV1A0A0A0MS02 117 aa12.57□□□□□ -0.4
SMC6-206ENST00000446852 IGHV3-53P01767 116 aa12.57□□□□□ -0.4
SMC6-206ENST00000446852 TMEM141Q96I45 108 aa12.56□□□□□ -0.4
SMC6-206ENST00000446852 Q6ZTI0 123 aa12.56□□□□□ -0.4
SMC6-206ENST00000446852 C20orf203Q8NBC4 194 aa12.56□□□□□ -0.4
SMC6-206ENST00000446852 TNFRSF18Q9Y5U5 241 aa12.56□□□□□ -0.4
SMC6-206ENST00000446852 C12orf54Q6X4T0 127 aa12.55□□□□□ -0.4
SMC6-206ENST00000446852 TRRAPQ9Y4A5 3859 aa12.54□□□□□ -0.4
SMC6-206ENST00000446852 IGLV4-69A0A075B6H9 119 aa12.54□□□□□ -0.4
SMC6-206ENST00000446852 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
SMC6-206ENST00000446852 PMVKQ15126 192 aa12.54□□□□□ -0.4
SMC6-206ENST00000446852 OPRPNQ99935 248 aaPredicted RBP12.54□□□□□ -0.4
SMC6-206ENST00000446852 C1QTNF4Q9BXJ3 329 aa12.54□□□□□ -0.4
SMC6-206ENST00000446852 CST9LQ9H4G1 147 aa12.54□□□□□ -0.4
SMC6-206ENST00000446852 SIVA1O15304 175 aa12.53□□□□□ -0.4
SMC6-206ENST00000446852 ZNF479Q96JC4 524 aa12.53□□□□□ -0.4
SMC6-206ENST00000446852 CITED1Q99966 193 aa12.53□□□□□ -0.4
SMC6-206ENST00000446852 EMP1P54849 157 aa12.53□□□□□ -0.4
SMC6-206ENST00000446852 Q6ZVH6 145 aa12.53□□□□□ -0.4
SMC6-206ENST00000446852 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
SMC6-206ENST00000446852 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
SMC6-206ENST00000446852 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
SMC6-206ENST00000446852 DAZ2Q13117 558 aaKnown RBP12.51□□□□□ -0.41
SMC6-206ENST00000446852 TMEM97Q5BJF2 176 aa12.51□□□□□ -0.41
SMC6-206ENST00000446852 MAPKAPK5-AS1Q8N8E1 139 aa12.51□□□□□ -0.41
SMC6-206ENST00000446852 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms