RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SUMO4Q6EEV6 95 aa12.43□□□□□ -0.42
LAPTM4B-201ENST00000445593 RNF152Q8N8N0 203 aa12.43□□□□□ -0.42
LAPTM4B-201ENST00000445593 KRTAP1-1Q07627 177 aa12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 FOXI2Q6ZQN5 318 aa12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 Q8N2B8 174 aa12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 PEMTQ9UBM1 199 aa12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 EMP1P54849 157 aa12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 ZC2HC1BQ5TFG8 222 aa12.42□□□□□ -0.42
LAPTM4B-201ENST00000445593 ANK3Q12955 4377 aaKnown RBP12.41□□□□□ -0.42
LAPTM4B-201ENST00000445593 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
LAPTM4B-201ENST00000445593 K7EP34 96 aa12.41□□□□□ -0.42
LAPTM4B-201ENST00000445593 SCGB3A1Q96QR1 104 aa12.41□□□□□ -0.42
LAPTM4B-201ENST00000445593 COX8AP10176 69 aa12.41□□□□□ -0.42
LAPTM4B-201ENST00000445593 AMTNQ6UX39 209 aa12.41□□□□□ -0.42
LAPTM4B-201ENST00000445593 DUSP14O95147 198 aaKnown RBP12.4□□□□□ -0.42
LAPTM4B-201ENST00000445593 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
LAPTM4B-201ENST00000445593 LINC00315P59091 139 aa12.4□□□□□ -0.42
LAPTM4B-201ENST00000445593 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
LAPTM4B-201ENST00000445593 RPL39P62891 51 aaKnown RBP12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 C2orf66Q6UXQ4 117 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 MAP6D1Q9H9H5 199 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 XCL2Q9UBD3 114 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 IGKCP01834 107 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 PROK1P58294 105 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 NSUN5P1Q3KNT7 163 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 C20orf78Q9BR46 151 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 ANAPC13Q9BS18 74 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
LAPTM4B-201ENST00000445593 H3BMM0 161 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 K7ERJ3 54 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 CCL24O00175 119 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 TMEM97Q5BJF2 176 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 P0DMU3 169 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 FAM231AP0DMU4 169 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 FAM231CP0DMU5 169 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
LAPTM4B-201ENST00000445593 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
LAPTM4B-201ENST00000445593 ATP5LO75964 103 aa12.37□□□□□ -0.43
LAPTM4B-201ENST00000445593 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
LAPTM4B-201ENST00000445593 VWFP04275 2813 aa12.37□□□□□ -0.43
LAPTM4B-201ENST00000445593 NBEAL2Q6ZNJ1 2754 aa12.37□□□□□ -0.43
LAPTM4B-201ENST00000445593 FABP2P12104 132 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 LINC01587Q99440 93 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 ATRQ13535 2644 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 C9orf118A6NHY6 69 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 DPM2O94777 84 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 FGF6P10767 208 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 SFTA2Q6UW10 78 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 SPAG8Q99932 426 aaPredicted RBP12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 WFDC10AQ9H1F0 79 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 TRBV20-1A0A075B6N2 111 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 LINC01546A6NGU7 62 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 MT-ATP8P03928 68 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 ORMDL2Q53FV1 153 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 C9orf85Q96MD7 179 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 TP53TG1Q9Y2A0 90 aa12.36□□□□□ -0.43
LAPTM4B-201ENST00000445593 HHLA3Q9XRX5 114 aa12.35□□□□□ -0.43
LAPTM4B-201ENST00000445593 Q9UF83 564 aa12.34□□□□□ -0.43
LAPTM4B-201ENST00000445593 CRYGDP07320 174 aa12.34□□□□□ -0.43
LAPTM4B-201ENST00000445593 SCGB1A1P11684 91 aa12.34□□□□□ -0.43
LAPTM4B-201ENST00000445593 NXPH4O95158 308 aa12.34□□□□□ -0.43
LAPTM4B-201ENST00000445593 TMEM86BQ8N661 226 aa12.34□□□□□ -0.43
LAPTM4B-201ENST00000445593 ODF3Q96PU9 254 aa12.34□□□□□ -0.43
LAPTM4B-201ENST00000445593 OPRPNQ99935 248 aaPredicted RBP12.34□□□□□ -0.43
LAPTM4B-201ENST00000445593 H3BMG7 143 aa12.33□□□□□ -0.44
LAPTM4B-201ENST00000445593 J3QR89 54 aa12.33□□□□□ -0.44
LAPTM4B-201ENST00000445593 GCSHP23434 173 aa12.33□□□□□ -0.44
LAPTM4B-201ENST00000445593 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
LAPTM4B-201ENST00000445593 MRPL16Q9NX20 251 aaKnown RBP12.33□□□□□ -0.44
LAPTM4B-201ENST00000445593 KIR2DL4Q99706 377 aa12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 NSD1Q96L73 2696 aaPredicted RBP12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 HIVEP1P15822 2718 aa12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 TENM1Q9UKZ4 2725 aa12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 M0QXV9 152 aa12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 TOMM6Q96B49 74 aa12.32□□□□□ -0.44
LAPTM4B-201ENST00000445593 TRGV11A0A075B6L2 103 aa12.31□□□□□ -0.44
LAPTM4B-201ENST00000445593 A0A087WX48 190 aa12.31□□□□□ -0.44
LAPTM4B-201ENST00000445593 A6NDN8 102 aa12.31□□□□□ -0.44
LAPTM4B-201ENST00000445593 ZFP2Q6ZN57 461 aa12.31□□□□□ -0.44
LAPTM4B-201ENST00000445593 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
LAPTM4B-201ENST00000445593 STHQ8IWL8 128 aa12.3□□□□□ -0.44
LAPTM4B-201ENST00000445593 PRSS29PA6NIE9 313 aa12.3□□□□□ -0.44
LAPTM4B-201ENST00000445593 M0QY20 66 aa12.3□□□□□ -0.44
LAPTM4B-201ENST00000445593 CYSLTR1Q9Y271 337 aa12.3□□□□□ -0.44
LAPTM4B-201ENST00000445593 TEX29Q8N6K0 151 aa12.3□□□□□ -0.44
LAPTM4B-201ENST00000445593 ZNF418Q8TF45 676 aaPredicted RBP12.3□□□□□ -0.44
LAPTM4B-201ENST00000445593 C1QTNF4Q9BXJ3 329 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms