RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 LINC00173Q6ZV60 143 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
HDAC8-215ENST00000444609 TVP23CQ96ET8 276 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 SCGB3A2Q96PL1 93 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 SSBP4Q9BWG4 385 aaPredicted RBP5.86□□□□□ -1.47
HDAC8-215ENST00000444609 PIGBOS1A0A0B4J2F0 54 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 METTL15P1P0C7V9 234 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 CAMLGP49069 296 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 RAB14P61106 215 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 C9orf116Q5BN46 136 aaPredicted RBP5.85□□□□□ -1.47
HDAC8-215ENST00000444609 NTM-AS1Q6ZSK4 140 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 SLC51BQ86UW2 128 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 C20orf203Q8NBC4 194 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 OR10G8Q8NGN5 311 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 GGACTQ9BVM4 153 aa5.85□□□□□ -1.47
HDAC8-215ENST00000444609 A0A087WZ39 114 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 S100A11P31949 105 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 S100A12P80511 92 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 ID3Q02535 119 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 GAGE2BQ13066 116 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 KRTAP11-1Q8IUC1 163 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 LINC00337Q8N6G1 96 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 TREM1Q9NP99 234 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 MED9Q9NWA0 146 aa5.84□□□□□ -1.47
HDAC8-215ENST00000444609 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 M0R2T5 61 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 MPC2O95563 127 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 H2BFSP57053 126 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 ARL16Q0P5N6 197 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 TMUB2Q71RG4 321 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 TYMSOSQ8TAI1 123 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 MITD1Q8WV92 249 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 SMIM8Q96KF7 97 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 SLC25A2Q9BXI2 301 aa5.83□□□□□ -1.48
HDAC8-215ENST00000444609 A0A087X002 238 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 LOC105371267A0A1B0GV96 52 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 C9orf170A2RU37 121 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 RANP62826 216 aaKnown RBP5.82□□□□□ -1.48
HDAC8-215ENST00000444609 ZNF345Q14585 488 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 ZNF674Q2M3X9 581 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 TMEM128Q5BJH2 165 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 PHYHIPLQ96FC7 376 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 FAM167A-AS1Q96KT0 104 aa5.82□□□□□ -1.48
HDAC8-215ENST00000444609 FXYD6-FXYD2A0A087WZ82 144 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
HDAC8-215ENST00000444609 SIX6O95475 246 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 RPL29P47914 159 aaKnown RBP5.81□□□□□ -1.48
HDAC8-215ENST00000444609 ZNF80P51504 273 aaPredicted RBP5.81□□□□□ -1.48
HDAC8-215ENST00000444609 PPP1R1AQ13522 171 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 TMEM97Q5BJF2 176 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 FXYD5Q96DB9 178 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 NMES1Q9C002 83 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 PHLDA3Q9Y5J5 127 aa5.81□□□□□ -1.48
HDAC8-215ENST00000444609 IGLV4-60A0A075B6I1 120 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 ARPC5O15511 151 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 SFT2D2O95562 160 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 COMMD7Q86VX2 200 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 KCNRGQ8N5I3 272 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.8□□□□□ -1.48
HDAC8-215ENST00000444609 THAP6Q8TBB0 222 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
HDAC8-215ENST00000444609 TRBV25-1A0A075B6N4 114 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 LOC107984640A0A0U1RRK4 108 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 A0A1B0GUV1 79 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 KANTRA0A1W2PQU2 76 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 SSSCA1O60232 199 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 TSHBP01222 138 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 STX12Q86Y82 276 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 NEXN-AS1Q8NBZ9 246 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 LINC00526Q96FQ7 95 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 SFRP2Q96HF1 295 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 TNFSF18Q9UNG2 199 aa5.79□□□□□ -1.48
HDAC8-215ENST00000444609 BCL2L11O43521 198 aa5.78□□□□□ -1.48
HDAC8-215ENST00000444609 MBPP02686 304 aaPredicted RBP5.78□□□□□ -1.48
HDAC8-215ENST00000444609 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
HDAC8-215ENST00000444609 IQCJQ1A5X6 159 aa5.78□□□□□ -1.48
HDAC8-215ENST00000444609 GCSAMLQ5JQS6 135 aa5.78□□□□□ -1.48
HDAC8-215ENST00000444609 PPP1R1CQ8WVI7 109 aa5.78□□□□□ -1.48
HDAC8-215ENST00000444609 DERL1Q9BUN8 251 aa5.78□□□□□ -1.48
HDAC8-215ENST00000444609 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
HDAC8-215ENST00000444609 PET100P0DJ07 73 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 FGF6P10767 208 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 SULT1A2P50226 295 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 SYCNQ0VAF6 134 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 MIR17HGQ75NE6 70 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 TSKUQ8WUA8 353 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 AQP10Q96PS8 301 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 IL36BQ9NZH7 164 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 OR5AC2Q9NZP5 309 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 WDR83OSQ9Y284 106 aa5.77□□□□□ -1.49
HDAC8-215ENST00000444609 IGKV3D-20A0A0C4DH25 116 aa5.76□□□□□ -1.49
HDAC8-215ENST00000444609 TRBV6-1A0A0K0K1D8 114 aa5.76□□□□□ -1.49
HDAC8-215ENST00000444609 KRBOX1C9JBD0 128 aa5.76□□□□□ -1.49
HDAC8-215ENST00000444609 S100A9P06702 114 aaKnown RBP5.76□□□□□ -1.49
HDAC8-215ENST00000444609 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms