RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PTH2Q96A98 100 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 LAMTOR2Q9Y2Q5 125 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 KIF25-AS1Q9Y6Z4 181 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 GAS8-AS1O95177 125 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 GATA1P15976 413 aaPredicted RBP6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 ZNF25P17030 456 aaPredicted RBP6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 EMP1P54849 157 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 PRSS3P2Q8NHM4 247 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 IL17DQ8TAD2 202 aa6.85□□□□□ -1.31
SMPD4P1-203ENST00000443839 TRAV9-2A0A087WT02 112 aa6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 C20orf202A1L168 122 aa6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 CRYGDP07320 174 aa6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 LINC00315P59091 139 aa6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 DAZ2Q13117 558 aaKnown RBP6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 ATOH7Q8N100 152 aa6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 RASL10AQ92737 203 aa6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 MAP1LC3AQ9H492 121 aa6.84□□□□□ -1.31
SMPD4P1-203ENST00000443839 IGHV3-73A0A0B4J1V6 119 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 IGHV1-24A0A0C4DH33 117 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 PLAC8L1A1L4L8 177 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 SMIM9A6NGZ8 99 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 LINC00614P0C842 121 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 BATFQ16520 125 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 LGALS9BQ3B8N2 356 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 SUMO4Q6EEV6 95 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 Q6ZN92 141 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 Q6ZTI0 123 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 SPATA12Q7Z6I5 190 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 OR11H2Q8NH07 326 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 TMEM70Q9BUB7 260 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 A8MZ25 164 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 DLEU1O43261 78 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 PPP1R17O96001 155 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 HNRNPA3P51991 378 aaKnown RBP6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 RIPPLY3P57055 190 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 GAGE1Q13065 139 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 CFAP126Q5VTH2 177 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 POM121L12Q8N7R1 296 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 NRACQ8N912 160 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 X6R8D5 127 aa6.83□□□□□ -1.32
SMPD4P1-203ENST00000443839 NACAE9PAV3 2078 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 H0Y8G0 127 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 RHODO00212 210 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 IFI27P40305 119 aaPredicted RBP6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 AP5S1Q9NUS5 200 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 MRPS16Q9Y3D3 137 aaKnown RBP6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 TRGV2A0A075B6R0 118 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 GAGE12BA1L429 117 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 GAGE7O76087 117 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 GAGE12FP0CL80 117 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 GAGE12GP0CL81 117 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 GAGE12IP0CL82 117 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 OR4C5Q8NGB2 326 aa6.82□□□□□ -1.32
SMPD4P1-203ENST00000443839 SYS1-DBNDD2H3BUS1 97 aa6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 RS1O15537 224 aa6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 LEPROTL1O95214 131 aa6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 RNF183Q96D59 192 aa6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 ZNF479Q96JC4 524 aa6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 OVOL2Q9BRP0 275 aa6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 NXT2Q9NPJ8 142 aaKnown RBP6.81□□□□□ -1.32
SMPD4P1-203ENST00000443839 H7C1H1 209 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 M0QY20 66 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 PRB2P02812 416 aaPredicted RBP6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 STPG4Q8N801 248 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 C20orf78Q9BR46 151 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 DNAH3Q8TD57 4116 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 IGHV3-53P01767 116 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 MIFP14174 115 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 UFSP1Q6NVU6 142 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 ZFP2Q6ZN57 461 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 ST20Q9HBF5 79 aa6.8□□□□□ -1.32
SMPD4P1-203ENST00000443839 TRAV4A0A0B4J268 109 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 IGHV4-28A0A0C4DH34 117 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 DEFB4AO15263 64 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 NPSP0C0P6 89 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 DEFB130BP0DP73 79 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 DEFB130AP0DP74 79 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 Q8N8P6 123 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 KPRPQ5T749 579 aaPredicted RBP6.79□□□□□ -1.32
SMPD4P1-203ENST00000443839 FAM222AQ5U5X8 452 aa6.78□□□□□ -1.32
SMPD4P1-203ENST00000443839 Q6ZSN1 163 aa6.78□□□□□ -1.32
SMPD4P1-203ENST00000443839 Q8NAQ8 132 aa6.78□□□□□ -1.32
SMPD4P1-203ENST00000443839 MAP1LC3CQ9BXW4 147 aa6.78□□□□□ -1.32
SMPD4P1-203ENST00000443839 HSPB8Q9UJY1 196 aa6.78□□□□□ -1.32
SMPD4P1-203ENST00000443839 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
SMPD4P1-203ENST00000443839 IGLV2-18A0A075B6J9 118 aa6.77□□□□□ -1.33
SMPD4P1-203ENST00000443839 SDHAF1A6NFY7 115 aa6.77□□□□□ -1.33
SMPD4P1-203ENST00000443839 P0DMU3 169 aa6.77□□□□□ -1.33
SMPD4P1-203ENST00000443839 FAM231AP0DMU4 169 aa6.77□□□□□ -1.33
SMPD4P1-203ENST00000443839 FAM231CP0DMU5 169 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms