RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 A0A0J9YX75 114 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 MINOS1Q5TGZ0 78 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 KLK5Q9Y337 293 aaPredicted RBP3.8□□□□□ -1.8
HERC1-201ENST00000443617 IGKV3-7A0A075B6H7 116 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 M0R1W7 72 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 ZFAND2AQ8N6M9 145 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 MSRB2Q9Y3D2 182 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 MIAQ16674 131 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 DEFB121Q5J5C9 76 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 LST1O00453 97 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 IGHV1-69P01742 117 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 CXCL5P42830 114 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 IGHV4OR15-8A0A075B7B6 117 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 A0A087WW49 117 aa3.8□□□□□ -1.8
HERC1-201ENST00000443617 COL5A1P20908 1838 aaPredicted RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 SYNJ2BPP57105 145 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 ADAMTSL4-AS1Q5T5F5 129 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 MBD3L4A6NDZ8 208 aaPredicted RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 MBD3L3A6NE82 208 aaPredicted RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 MBD3L5A6NJ08 208 aaPredicted RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 MED14OSP0DP75 135 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 MBD3L2Q8NHZ7 208 aaPredicted RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 SNRPD3P62318 126 aaKnown RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 SEM1Q6ZVN7 128 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 PEMTQ9UBM1 199 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 AMELXQ99217 191 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 A0A0G2JNJ9 132 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 A0A1W2PNU3 283 aaPredicted RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 Q9UFV3 132 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 IGHV3-73A0A0B4J1V6 119 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 COX7CP15954 63 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 ZNF672Q499Z4 452 aaPredicted RBP3.79□□□□□ -1.8
HERC1-201ENST00000443617 TMEM61Q8N0U2 210 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 MINOS1-NBL1R4GNA1 71 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 EBI3Q14213 229 aa3.79□□□□□ -1.8
HERC1-201ENST00000443617 IGLV1-47P01700 117 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
HERC1-201ENST00000443617 TMEM258P61165 79 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 TRAV13-2A0A0B4J235 113 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 PRR9Q5T870 116 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 ZNF575Q86XF7 245 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 A0A0U1RRA0 63 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 CLPSL1A2RUU4 121 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 C9orf139Q6ZV77 190 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 RS1O15537 224 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 FAM215AQ9Y5M1 114 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 LTBP2Q14767 1821 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 G3V318 75 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 VSIG2Q96IQ7 327 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 ZFAND3Q9H8U3 227 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 JPT2Q9H910 190 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 IGHV7-4-1A0A0J9YVY3 117 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 M0QY20 66 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 IGHV1-58A0A0C4DH39 117 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 C19orf54Q5BKX5 351 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 S100A7L2Q5SY68 101 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 LINC01560Q8TB33 94 aa3.78□□□□□ -1.8
HERC1-201ENST00000443617 COX7A2LO14548 114 aa3.78□□□□□ -1.81
HERC1-201ENST00000443617 POM121L12Q8N7R1 296 aa3.78□□□□□ -1.81
HERC1-201ENST00000443617 RAI1Q7Z5J4 1906 aaPredicted RBP3.78□□□□□ -1.81
HERC1-201ENST00000443617 F5H768 121 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 FAM222AQ5U5X8 452 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 HRCT1Q6UXD1 115 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 E7EQL1 145 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 POLR2KP53803 58 aaKnown RBP3.77□□□□□ -1.81
HERC1-201ENST00000443617 IGHV7-81A0A0B4J1V7 117 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 TIMM17BO60830 172 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 CHD7Q9P2D1 2997 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 SDIM1Q6ZPB5 146 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 IGKV3-20P01619 116 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 MRAPQ8TCY5 172 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 C20orf203Q8NBC4 194 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 FAM223BA6NKX1 122 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 FAM223AQ8IWN6 122 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 CCDC140Q96MF4 163 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 TMEM243Q9BU79 118 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 SOCS3O14543 225 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 AKAP13Q12802 2813 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 MALP21145 153 aa3.77□□□□□ -1.81
HERC1-201ENST00000443617 MAP1AP78559 2803 aaPredicted RBP3.77□□□□□ -1.81
HERC1-201ENST00000443617 CRYGDP07320 174 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 TRAV25A0A0B4J276 109 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 TINCRA0A1B0GVN0 87 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 ITLN2Q8WWU7 325 aaPredicted RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 TRBV27A0A0K0K1C4 114 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 DEFB1P60022 68 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 USMG5Q96IX5 58 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 PIMREGQ9BSJ6 248 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 Q9H8V8 135 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 DCANP1Q8TF63 244 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 RNASE1P07998 156 aaKnown RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 NXPH4O95158 308 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 NSUN5P1Q3KNT7 163 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 TIRAPP58753 221 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 IGHV3-16A0A0C4DH30 117 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 NDUFC2O95298 119 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 HIST1H4AP62805 103 aaKnown RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 DAZ2Q13117 558 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms