RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 KMT2BQ9UMN6 2715 aaPredicted RBP9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 A8MZ25 164 aa9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 NFE4Q86UQ8 179 aa9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
SLC48A1-201ENST00000442218 IGHG2P01859 326 aa9.75□□□□□ -0.85
SLC48A1-201ENST00000442218 KIF25-AS1Q9Y6Z4 181 aa9.75□□□□□ -0.85
SLC48A1-201ENST00000442218 F8W1H4 67 aa9.75□□□□□ -0.85
SLC48A1-201ENST00000442218 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
SLC48A1-201ENST00000442218 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
SLC48A1-201ENST00000442218 PRSS47A8MTI9 375 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 NDUFS8O00217 210 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 Q5PR19 223 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 C18orf65Q6ZTR6 163 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 HELZ2Q9BYK8 2649 aaKnown RBP9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 A0A0J9YXV3 536 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 DEFB112Q30KQ8 113 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 DCANP1Q8TF63 244 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 A0A0J9YY99 117 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 MSMBP08118 114 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 PMVKQ15126 192 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 SPXQ9BT56 116 aa9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 SETXQ7Z333 2677 aaKnown RBP9.74□□□□□ -0.85
SLC48A1-201ENST00000442218 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
SLC48A1-201ENST00000442218 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
SLC48A1-201ENST00000442218 A6NDX4 124 aa9.73□□□□□ -0.85
SLC48A1-201ENST00000442218 TCL1BO95988 128 aa9.73□□□□□ -0.85
SLC48A1-201ENST00000442218 CRIP2P52943 208 aaPredicted RBP9.73□□□□□ -0.85
SLC48A1-201ENST00000442218 FHL3Q13643 280 aa9.73□□□□□ -0.85
SLC48A1-201ENST00000442218 POLR2KP53803 58 aaKnown RBP9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 KHDC1LQ5JSQ8 128 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 Q6ZSV7 163 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 HECTD1Q9ULT8 2610 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 TRAV8-3A0A0A6YYJ7 113 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 CFC1BP0CG36 223 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 CFC1P0CG37 223 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 LENEPQ9Y5L5 61 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 VCYO14598 125 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 PRSS2P07478 247 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 TAL2Q16559 108 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 HIST2H2BCQ6DN03 193 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
SLC48A1-201ENST00000442218 A0A0U1RRA0 63 aa9.71□□□□□ -0.85
SLC48A1-201ENST00000442218 KLLNB2CW77 178 aa9.71□□□□□ -0.85
SLC48A1-201ENST00000442218 J3QQQ9 107 aa9.71□□□□□ -0.85
SLC48A1-201ENST00000442218 Q1RN00 199 aa9.71□□□□□ -0.85
SLC48A1-201ENST00000442218 C11orf44Q8N8P7 122 aa9.71□□□□□ -0.85
SLC48A1-201ENST00000442218 USMG5Q96IX5 58 aa9.71□□□□□ -0.85
SLC48A1-201ENST00000442218 NDUFA11Q86Y39 141 aa9.71□□□□□ -0.86
SLC48A1-201ENST00000442218 DLX4Q92988 240 aaPredicted RBP9.71□□□□□ -0.86
SLC48A1-201ENST00000442218 A4D1N5 150 aa9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 HERVK_113P61574 105 aa9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 HIVEP2P31629 2446 aa9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 ELANEP08246 267 aa9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 RBMY1A1P0DJD3 496 aaKnown RBP9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 RBMY1CP0DJD4 496 aa9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 ID1P41134 155 aa9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 RBMY1FQ15415 496 aaKnown RBP9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 DAND5Q8N907 189 aa9.7□□□□□ -0.86
SLC48A1-201ENST00000442218 J3QR89 54 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 IGHV4OR15-8A0A075B7B6 117 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 A0A087WW49 117 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 M0QY20 66 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 FOXI1Q12951 378 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 EIF4EBP3O60516 100 aaPredicted RBP9.69□□□□□ -0.86
SLC48A1-201ENST00000442218 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 A6NJY4 79 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 IGLV1-40P01703 118 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 UBE2D1P51668 147 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 A0A096LNT2 108 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 SLURP1P55000 103 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
SLC48A1-201ENST00000442218 FASNP49327 2511 aaKnown RBP9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 IGHV1OR15-1A0A075B7D0 117 aa9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 A0A0J9YX75 114 aa9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 IGKV2-29A2NJV5 120 aaPredicted RBP9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 B4DSR2 109 aa9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 C9JAW5 83 aa9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 DEFB131AP59861 70 aa9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 SNRPD3P62318 126 aaKnown RBP9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 CARD19Q96LW7 228 aa9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 GCN1Q92616 2671 aaKnown RBP9.67□□□□□ -0.86
SLC48A1-201ENST00000442218 DSCR9P59020 149 aa9.66□□□□□ -0.86
SLC48A1-201ENST00000442218 APRG1Q8IVJ8 170 aa9.66□□□□□ -0.86
SLC48A1-201ENST00000442218 Q6ZSN1 163 aa9.66□□□□□ -0.86
SLC48A1-201ENST00000442218 ZNF625Q96I27 306 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms