RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CFAP126Q5VTH2 177 aa9.56□□□□□ -0.88
CPSF4-206ENST00000441580 ERASQ7Z444 233 aa9.56□□□□□ -0.88
CPSF4-206ENST00000441580 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
CPSF4-206ENST00000441580 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
CPSF4-206ENST00000441580 MRPL16Q9NX20 251 aaKnown RBP9.56□□□□□ -0.88
CPSF4-206ENST00000441580 IGHV3OR16-12A0A075B7B8 117 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 I3L3M4 83 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 COX8AP10176 69 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 SNHG12Q9BXW3 62 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 WFDC10AQ9H1F0 79 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 TP53TG1Q9Y2A0 90 aa9.55□□□□□ -0.88
CPSF4-206ENST00000441580 F8VRH5 84 aa9.54□□□□□ -0.88
CPSF4-206ENST00000441580 IGHV3-53P01767 116 aa9.54□□□□□ -0.88
CPSF4-206ENST00000441580 RPL35AP18077 110 aaKnown RBP9.54□□□□□ -0.88
CPSF4-206ENST00000441580 NEGR1Q7Z3B1 354 aa9.54□□□□□ -0.88
CPSF4-206ENST00000441580 DKK2Q9UBU2 259 aa9.54□□□□□ -0.88
CPSF4-206ENST00000441580 TRAV4A0A0B4J268 109 aa9.53□□□□□ -0.88
CPSF4-206ENST00000441580 CIDEAO60543 219 aa9.53□□□□□ -0.88
CPSF4-206ENST00000441580 GIG44P09565 113 aaPredicted RBP9.53□□□□□ -0.88
CPSF4-206ENST00000441580 DAZ2Q13117 558 aaKnown RBP9.53□□□□□ -0.88
CPSF4-206ENST00000441580 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
CPSF4-206ENST00000441580 TNFRSF18Q9Y5U5 241 aa9.53□□□□□ -0.88
CPSF4-206ENST00000441580 FN1P02751 2386 aaKnown RBP9.53□□□□□ -0.88
CPSF4-206ENST00000441580 TRGV1A0A0A0MS02 117 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 DLEU1O43261 78 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 TSHBP01222 138 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 AZU1P20160 251 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 RRN3P1Q2M238 152 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 ANKRD39Q53RE8 183 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 OTOGQ6ZRI0 2925 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 MRPL35Q9NZE8 188 aaKnown RBP9.52□□□□□ -0.89
CPSF4-206ENST00000441580 CHTOPQ9Y3Y2 248 aaKnown RBP9.52□□□□□ -0.89
CPSF4-206ENST00000441580 SORL1Q92673 2214 aa9.52□□□□□ -0.89
CPSF4-206ENST00000441580 NSD1Q96L73 2696 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-206ENST00000441580 IGHV3-73A0A0B4J1V6 119 aa9.51□□□□□ -0.89
CPSF4-206ENST00000441580 OR4C5Q8NGB2 326 aa9.51□□□□□ -0.89
CPSF4-206ENST00000441580 WNK1Q9H4A3 2382 aa9.51□□□□□ -0.89
CPSF4-206ENST00000441580 TRBV10-1A0A0K0K1A3 114 aa9.5□□□□□ -0.89
CPSF4-206ENST00000441580 NPSP0C0P6 89 aa9.5□□□□□ -0.89
CPSF4-206ENST00000441580 CSNK1G2-AS1Q8NCQ2 148 aa9.5□□□□□ -0.89
CPSF4-206ENST00000441580 NOTCH2Q04721 2471 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 IGIPA6NJ69 53 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 K7EQD1 137 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 WIPF1O43516 503 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 PRM2P04554 102 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 FGF6P10767 208 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 PMVKQ15126 192 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 ZC2HC1BQ5TFG8 222 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 BOD1L2Q8IYS8 172 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 C20orf203Q8NBC4 194 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 NACAE9PAV3 2078 aa9.49□□□□□ -0.89
CPSF4-206ENST00000441580 C2CD3Q4AC94 2353 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 SIVA1O15304 175 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 NMUP48645 174 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 TMEM97Q5BJF2 176 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 COL5A1-AS1Q5SY13 56 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 C12orf54Q6X4T0 127 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 STPG4Q8N801 248 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 OVOL2Q9BRP0 275 aa9.48□□□□□ -0.89
CPSF4-206ENST00000441580 PLAC8L1A1L4L8 177 aa9.47□□□□□ -0.89
CPSF4-206ENST00000441580 APOC4P55056 127 aa9.47□□□□□ -0.89
CPSF4-206ENST00000441580 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
CPSF4-206ENST00000441580 BATFQ16520 125 aa9.47□□□□□ -0.89
CPSF4-206ENST00000441580 Q6ZTI0 123 aa9.47□□□□□ -0.89
CPSF4-206ENST00000441580 KIR2DL5BQ8NHK3 375 aa9.47□□□□□ -0.89
CPSF4-206ENST00000441580 HHLA3Q9XRX5 114 aa9.47□□□□□ -0.89
CPSF4-206ENST00000441580 SMIM9A6NGZ8 99 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 PRSS29PA6NIE9 313 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 P0DMU3 169 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 FAM231AP0DMU4 169 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 FAM231CP0DMU5 169 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 CRYBA4P53673 196 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 HERVK_113P61574 105 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
CPSF4-206ENST00000441580 COTL1Q14019 142 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 WFDC9Q8NEX5 89 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
CPSF4-206ENST00000441580 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.9
CPSF4-206ENST00000441580 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.9
CPSF4-206ENST00000441580 SETXQ7Z333 2677 aaKnown RBP9.46□□□□□ -0.9
CPSF4-206ENST00000441580 C2orf91Q6ZV80 131 aa9.45□□□□□ -0.9
CPSF4-206ENST00000441580 TRGV2A0A075B6R0 118 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 HSD52Q0P140 79 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 Q6ZSN1 163 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 OR11H2Q8NH07 326 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 ZNF479Q96JC4 524 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 TP73-AS1Q9UF72 201 aa9.44□□□□□ -0.9
CPSF4-206ENST00000441580 IGLV4-69A0A075B6H9 119 aa9.43□□□□□ -0.9
CPSF4-206ENST00000441580 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
CPSF4-206ENST00000441580 A0A1B0GV90 55 aa9.43□□□□□ -0.9
CPSF4-206ENST00000441580 HINT1P49773 126 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-206ENST00000441580 DAZ4Q86SG3 579 aaKnown RBP9.43□□□□□ -0.9
CPSF4-206ENST00000441580 DAZ3Q9NR90 486 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms