RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 OR10J3Q5JRS4 329 aa14.8□□□□□ -0.04
VPS13B-204ENST00000441350 TRBV6-5A0A0K0K1A5 114 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BKO60814 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BJP06899 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BOP23527 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BBP33778 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BDP58876 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BCP62807 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 RHOHQ15669 191 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST2H2BEQ16778 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.79□□□□□ -0.04
VPS13B-204ENST00000441350 NEXN-AS1Q8NBZ9 246 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BHQ93079 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BNQ99877 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 HIST1H2BMQ99879 126 aa14.79□□□□□ -0.04
VPS13B-204ENST00000441350 C18orf32Q8TCD1 76 aa14.78□□□□□ -0.04
VPS13B-204ENST00000441350 VSIG2Q96IQ7 327 aa14.77□□□□□ -0.04
VPS13B-204ENST00000441350 DNAJC30Q96LL9 226 aa14.77□□□□□ -0.04
VPS13B-204ENST00000441350 C20orf78Q9BR46 151 aa14.77□□□□□ -0.04
VPS13B-204ENST00000441350 PRADC1Q9BSG0 188 aa14.77□□□□□ -0.04
VPS13B-204ENST00000441350 DEFB131BA0A096LNP1 70 aa14.77□□□□□ -0.05
VPS13B-204ENST00000441350 PRSS47A8MTI9 375 aa14.77□□□□□ -0.05
VPS13B-204ENST00000441350 SUMO2P61956 95 aaKnown RBP14.77□□□□□ -0.05
VPS13B-204ENST00000441350 TRAV26-1A0A087WT03 109 aa14.76□□□□□ -0.05
VPS13B-204ENST00000441350 LOC100131303A0A0U1RQF7 123 aa14.76□□□□□ -0.05
VPS13B-204ENST00000441350 PAX4O43316 350 aa14.76□□□□□ -0.05
VPS13B-204ENST00000441350 ST20Q9HBF5 79 aa14.76□□□□□ -0.05
VPS13B-204ENST00000441350 TRAV10A0A0B4J240 114 aa14.75□□□□□ -0.05
VPS13B-204ENST00000441350 RAB5BP61020 215 aa14.75□□□□□ -0.05
VPS13B-204ENST00000441350 Q0VG73 95 aa14.75□□□□□ -0.05
VPS13B-204ENST00000441350 MAP1LC3AQ9H492 121 aa14.75□□□□□ -0.05
VPS13B-204ENST00000441350 TNFRSF18Q9Y5U5 241 aa14.75□□□□□ -0.05
VPS13B-204ENST00000441350 TRBV7-3A0A075B6L6 115 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 POLR2KP53803 58 aaKnown RBP14.74□□□□□ -0.05
VPS13B-204ENST00000441350 RPL32P62910 135 aaKnown RBP14.74□□□□□ -0.05
VPS13B-204ENST00000441350 IQCJQ1A5X6 159 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 TMEM70Q9BUB7 260 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 A0A0J9YY99 117 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 SDHAF1A6NFY7 115 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 LINC00694P0DN24 101 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 GYPEP15421 78 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 RPL36AP83881 106 aaKnown RBP14.74□□□□□ -0.05
VPS13B-204ENST00000441350 ZNRF2Q8NHG8 242 aa14.74□□□□□ -0.05
VPS13B-204ENST00000441350 RPL36ALQ969Q0 106 aaKnown RBP14.74□□□□□ -0.05
VPS13B-204ENST00000441350 LOC389332A0A1B0GUA5 103 aa14.73□□□□□ -0.05
VPS13B-204ENST00000441350 GAGE12JA6NER3 117 aa14.73□□□□□ -0.05
VPS13B-204ENST00000441350 GAGE1Q13065 139 aa14.73□□□□□ -0.05
VPS13B-204ENST00000441350 GAGE4Q13068 117 aa14.73□□□□□ -0.05
VPS13B-204ENST00000441350 GAGE5Q13069 117 aa14.73□□□□□ -0.05
VPS13B-204ENST00000441350 GAGE13Q4V321 117 aa14.73□□□□□ -0.05
VPS13B-204ENST00000441350 IGLV2-18A0A075B6J9 118 aa14.72□□□□□ -0.05
VPS13B-204ENST00000441350 H3BNG1 76 aa14.72□□□□□ -0.05
VPS13B-204ENST00000441350 UBE2D3P61077 147 aa14.72□□□□□ -0.05
VPS13B-204ENST00000441350 UBE2D2P62837 147 aa14.72□□□□□ -0.05
VPS13B-204ENST00000441350 SMIM2Q9BVW6 85 aa14.72□□□□□ -0.05
VPS13B-204ENST00000441350 TRBV27A0A0K0K1C4 114 aa14.71□□□□□ -0.05
VPS13B-204ENST00000441350 PHLDA1Q8WV24 401 aaPredicted RBP14.71□□□□□ -0.05
VPS13B-204ENST00000441350 IFI27P40305 119 aaPredicted RBP14.7□□□□□ -0.06
VPS13B-204ENST00000441350 VCYO14598 125 aa14.7□□□□□ -0.06
VPS13B-204ENST00000441350 PMCHP20382 165 aa14.7□□□□□ -0.06
VPS13B-204ENST00000441350 Q8N8P6 123 aa14.7□□□□□ -0.06
VPS13B-204ENST00000441350 NXT2Q9NPJ8 142 aaKnown RBP14.7□□□□□ -0.06
VPS13B-204ENST00000441350 TGP01266 2768 aa14.69□□□□□ -0.06
VPS13B-204ENST00000441350 NEGR1Q7Z3B1 354 aa14.69□□□□□ -0.06
VPS13B-204ENST00000441350 PRSS3P2Q8NHM4 247 aa14.69□□□□□ -0.06
VPS13B-204ENST00000441350 URB1-AS1Q96HZ7 61 aa14.69□□□□□ -0.06
VPS13B-204ENST00000441350 NIT1Q86X76 327 aa14.68□□□□□ -0.06
VPS13B-204ENST00000441350 BAGE3Q86Y29 109 aa14.68□□□□□ -0.06
VPS13B-204ENST00000441350 I3L3M4 83 aa14.67□□□□□ -0.06
VPS13B-204ENST00000441350 COA6Q5JTJ3 125 aaKnown RBP14.67□□□□□ -0.06
VPS13B-204ENST00000441350 DAZ4Q86SG3 579 aaKnown RBP14.67□□□□□ -0.06
VPS13B-204ENST00000441350 DAZ3Q9NR90 486 aaKnown RBP14.67□□□□□ -0.06
VPS13B-204ENST00000441350 LINC01546A6NGU7 62 aa14.66□□□□□ -0.06
VPS13B-204ENST00000441350 LINC00310P59036 64 aa14.66□□□□□ -0.06
VPS13B-204ENST00000441350 MRPL23Q16540 153 aaKnown RBP14.66□□□□□ -0.06
VPS13B-204ENST00000441350 ICOSQ9Y6W8 199 aa14.66□□□□□ -0.06
VPS13B-204ENST00000441350 DNAH7Q8WXX0 4024 aa14.66□□□□□ -0.06
VPS13B-204ENST00000441350 A0A096LPF7 62 aa14.66□□□□□ -0.06
VPS13B-204ENST00000441350 LINC00614P0C842 121 aa14.66□□□□□ -0.06
VPS13B-204ENST00000441350 NDUFA6P56556 154 aa14.66□□□□□ -0.06
VPS13B-204ENST00000441350 IGHV3-38A0A0C4DH36 116 aa14.65□□□□□ -0.06
VPS13B-204ENST00000441350 TMA7Q9Y2S6 64 aaKnown RBP14.65□□□□□ -0.06
VPS13B-204ENST00000441350 SERF1AO75920 110 aa14.64□□□□□ -0.07
VPS13B-204ENST00000441350 TSHBP01222 138 aa14.64□□□□□ -0.07
VPS13B-204ENST00000441350 FA2HQ7L5A8 372 aa14.64□□□□□ -0.07
VPS13B-204ENST00000441350 ATP6V0E2Q8NHE4 81 aa14.64□□□□□ -0.07
VPS13B-204ENST00000441350 KIR2DL4Q99706 377 aa14.64□□□□□ -0.07
VPS13B-204ENST00000441350 TCAPO15273 167 aa14.63□□□□□ -0.07
VPS13B-204ENST00000441350 RNASEKQ6P5S7 137 aaKnown RBP14.63□□□□□ -0.07
VPS13B-204ENST00000441350 SH2D6Q7Z4S9 175 aa14.63□□□□□ -0.07
VPS13B-204ENST00000441350 DEFB104AQ8WTQ1 72 aa14.63□□□□□ -0.07
VPS13B-204ENST00000441350 CHCHD1Q96BP2 118 aaKnown RBP14.63□□□□□ -0.07
VPS13B-204ENST00000441350 K7EMI3 77 aa14.63□□□□□ -0.07
VPS13B-204ENST00000441350 NUPR1O60356 82 aa14.63□□□□□ -0.07
VPS13B-204ENST00000441350 AP5S1Q9NUS5 200 aa14.63□□□□□ -0.07
VPS13B-204ENST00000441350 CEMP1Q6PRD7 247 aaPredicted RBP14.62□□□□□ -0.07
VPS13B-204ENST00000441350 COTL1Q14019 142 aa14.61□□□□□ -0.07
VPS13B-204ENST00000441350 NTM-AS1Q6ZSK4 140 aa14.61□□□□□ -0.07
VPS13B-204ENST00000441350 C15orf53Q8NAA6 179 aa14.61□□□□□ -0.07
VPS13B-204ENST00000441350 DYNC2H1Q8NCM8 4307 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms