RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 FAM231AP0DMU4 169 aa16.42■□□□□ 0.22
LONRF3-204ENST00000439603 FAM231CP0DMU5 169 aa16.42■□□□□ 0.22
LONRF3-204ENST00000439603 OR10J3Q5JRS4 329 aa16.42■□□□□ 0.22
LONRF3-204ENST00000439603 HHLA3Q9XRX5 114 aa16.42■□□□□ 0.22
LONRF3-204ENST00000439603 K7EQD1 137 aa16.42■□□□□ 0.22
LONRF3-204ENST00000439603 Q6ZTC4 211 aa16.42■□□□□ 0.22
LONRF3-204ENST00000439603 NIT2Q9NQR4 276 aa16.42■□□□□ 0.22
LONRF3-204ENST00000439603 COL7A1Q02388 2944 aa16.41■□□□□ 0.22
LONRF3-204ENST00000439603 HTN3P15516 51 aa16.4■□□□□ 0.22
LONRF3-204ENST00000439603 C18orf32Q8TCD1 76 aa16.4■□□□□ 0.22
LONRF3-204ENST00000439603 Q9UF83 564 aa16.4■□□□□ 0.22
LONRF3-204ENST00000439603 F5H768 121 aa16.39■□□□□ 0.22
LONRF3-204ENST00000439603 PRO0255Q9UI72 69 aa16.39■□□□□ 0.22
LONRF3-204ENST00000439603 TRBV10-1A0A0K0K1A3 114 aa16.38■□□□□ 0.21
LONRF3-204ENST00000439603 CRYBA4P53673 196 aa16.38■□□□□ 0.21
LONRF3-204ENST00000439603 RHOHQ15669 191 aa16.38■□□□□ 0.21
LONRF3-204ENST00000439603 IQCJQ1A5X6 159 aa16.38■□□□□ 0.21
LONRF3-204ENST00000439603 NEXN-AS1Q8NBZ9 246 aa16.38■□□□□ 0.21
LONRF3-204ENST00000439603 TRBV6-5A0A0K0K1A5 114 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 SUMO2P61956 95 aaKnown RBP16.37■□□□□ 0.21
LONRF3-204ENST00000439603 Q0VG73 95 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 C20orf78Q9BR46 151 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 MAP1LC3AQ9H492 121 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 ST20Q9HBF5 79 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 LOC389332A0A1B0GUA5 103 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 DNAJC30Q96LL9 226 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 PRADC1Q9BSG0 188 aa16.37■□□□□ 0.21
LONRF3-204ENST00000439603 TNFRSF18Q9Y5U5 241 aa16.36■□□□□ 0.21
LONRF3-204ENST00000439603 PRSS47A8MTI9 375 aa16.35■□□□□ 0.21
LONRF3-204ENST00000439603 PAX4O43316 350 aa16.35■□□□□ 0.21
LONRF3-204ENST00000439603 RPL36AP83881 106 aaKnown RBP16.34■□□□□ 0.21
LONRF3-204ENST00000439603 BAGE3Q86Y29 109 aa16.34■□□□□ 0.21
LONRF3-204ENST00000439603 RPL36ALQ969Q0 106 aaKnown RBP16.34■□□□□ 0.21
LONRF3-204ENST00000439603 TRBV7-3A0A075B6L6 115 aa16.33■□□□□ 0.21
LONRF3-204ENST00000439603 TRAV26-1A0A087WT03 109 aa16.33■□□□□ 0.21
LONRF3-204ENST00000439603 LOC100131303A0A0U1RQF7 123 aa16.33■□□□□ 0.21
LONRF3-204ENST00000439603 SDHAF1A6NFY7 115 aa16.33■□□□□ 0.21
LONRF3-204ENST00000439603 POLR2KP53803 58 aaKnown RBP16.33■□□□□ 0.21
LONRF3-204ENST00000439603 ZNRF2Q8NHG8 242 aa16.33■□□□□ 0.21
LONRF3-204ENST00000439603 DEFB131BA0A096LNP1 70 aa16.33■□□□□ 0.2
LONRF3-204ENST00000439603 A0A0J9YY99 117 aa16.33■□□□□ 0.2
LONRF3-204ENST00000439603 IFI27P40305 119 aaPredicted RBP16.33■□□□□ 0.2
LONRF3-204ENST00000439603 NDUFA6P56556 154 aa16.33■□□□□ 0.2
LONRF3-204ENST00000439603 PRSS3P2Q8NHM4 247 aa16.33■□□□□ 0.2
LONRF3-204ENST00000439603 VSIG2Q96IQ7 327 aa16.33■□□□□ 0.2
LONRF3-204ENST00000439603 TMEM70Q9BUB7 260 aa16.33■□□□□ 0.2
LONRF3-204ENST00000439603 GAGE12JA6NER3 117 aa16.32■□□□□ 0.2
LONRF3-204ENST00000439603 GAGE1Q13065 139 aa16.32■□□□□ 0.2
LONRF3-204ENST00000439603 GAGE4Q13068 117 aa16.32■□□□□ 0.2
LONRF3-204ENST00000439603 GAGE5Q13069 117 aa16.32■□□□□ 0.2
LONRF3-204ENST00000439603 GAGE13Q4V321 117 aa16.32■□□□□ 0.2
LONRF3-204ENST00000439603 SMIM2Q9BVW6 85 aa16.32■□□□□ 0.2
LONRF3-204ENST00000439603 GYPEP15421 78 aa16.31■□□□□ 0.2
LONRF3-204ENST00000439603 RPL32P62910 135 aaKnown RBP16.31■□□□□ 0.2
LONRF3-204ENST00000439603 NXT2Q9NPJ8 142 aaKnown RBP16.31■□□□□ 0.2
LONRF3-204ENST00000439603 FBN3Q75N90 2809 aa16.31■□□□□ 0.2
LONRF3-204ENST00000439603 TRAV10A0A0B4J240 114 aa16.31■□□□□ 0.2
LONRF3-204ENST00000439603 NIT1Q86X76 327 aa16.31■□□□□ 0.2
LONRF3-204ENST00000439603 IGLV2-18A0A075B6J9 118 aa16.3■□□□□ 0.2
LONRF3-204ENST00000439603 VCYO14598 125 aa16.3■□□□□ 0.2
LONRF3-204ENST00000439603 PMCHP20382 165 aa16.3■□□□□ 0.2
LONRF3-204ENST00000439603 Q8N8P6 123 aa16.3■□□□□ 0.2
LONRF3-204ENST00000439603 TRBV27A0A0K0K1C4 114 aa16.29■□□□□ 0.2
LONRF3-204ENST00000439603 NEGR1Q7Z3B1 354 aa16.29■□□□□ 0.2
LONRF3-204ENST00000439603 URB1-AS1Q96HZ7 61 aa16.29■□□□□ 0.2
LONRF3-204ENST00000439603 LINC00614P0C842 121 aa16.29■□□□□ 0.2
LONRF3-204ENST00000439603 UBE2D3P61077 147 aa16.29■□□□□ 0.2
LONRF3-204ENST00000439603 UBE2D2P62837 147 aa16.29■□□□□ 0.2
LONRF3-204ENST00000439603 STAB2Q8WWQ8 2551 aa16.28■□□□□ 0.2
LONRF3-204ENST00000439603 S100A6P06703 90 aa16.28■□□□□ 0.2
LONRF3-204ENST00000439603 COA6Q5JTJ3 125 aaKnown RBP16.28■□□□□ 0.2
LONRF3-204ENST00000439603 FA2HQ7L5A8 372 aa16.28■□□□□ 0.2
LONRF3-204ENST00000439603 SERF1AO75920 110 aa16.27■□□□□ 0.2
LONRF3-204ENST00000439603 I3L3M4 83 aa16.27■□□□□ 0.19
LONRF3-204ENST00000439603 LINC00694P0DN24 101 aa16.27■□□□□ 0.19
LONRF3-204ENST00000439603 LINC00310P59036 64 aa16.27■□□□□ 0.19
LONRF3-204ENST00000439603 RNASEKQ6P5S7 137 aaKnown RBP16.27■□□□□ 0.19
LONRF3-204ENST00000439603 PHLDA1Q8WV24 401 aaPredicted RBP16.27■□□□□ 0.19
LONRF3-204ENST00000439603 IGHV3-38A0A0C4DH36 116 aa16.25■□□□□ 0.19
LONRF3-204ENST00000439603 H3BNG1 76 aa16.25■□□□□ 0.19
LONRF3-204ENST00000439603 DAZ4Q86SG3 579 aaKnown RBP16.25■□□□□ 0.19
LONRF3-204ENST00000439603 CHCHD1Q96BP2 118 aaKnown RBP16.25■□□□□ 0.19
LONRF3-204ENST00000439603 KIR2DL4Q99706 377 aa16.25■□□□□ 0.19
LONRF3-204ENST00000439603 DAZ3Q9NR90 486 aaKnown RBP16.25■□□□□ 0.19
LONRF3-204ENST00000439603 TCAPO15273 167 aa16.25■□□□□ 0.19
LONRF3-204ENST00000439603 NUPR1O60356 82 aa16.25■□□□□ 0.19
LONRF3-204ENST00000439603 DEFB104AQ8WTQ1 72 aa16.25■□□□□ 0.19
LONRF3-204ENST00000439603 AP5S1Q9NUS5 200 aa16.25■□□□□ 0.19
LONRF3-204ENST00000439603 LINC01546A6NGU7 62 aa16.24■□□□□ 0.19
LONRF3-204ENST00000439603 MRPL23Q16540 153 aaKnown RBP16.23■□□□□ 0.19
LONRF3-204ENST00000439603 ICOSQ9Y6W8 199 aa16.23■□□□□ 0.19
LONRF3-204ENST00000439603 K7EMI3 77 aa16.22■□□□□ 0.19
LONRF3-204ENST00000439603 ATP6V0E2Q8NHE4 81 aa16.22■□□□□ 0.19
LONRF3-204ENST00000439603 HSBP1O75506 76 aa16.21■□□□□ 0.19
LONRF3-204ENST00000439603 TSHBP01222 138 aa16.21■□□□□ 0.19
LONRF3-204ENST00000439603 FCER1GP30273 86 aa16.21■□□□□ 0.19
LONRF3-204ENST00000439603 SNRPEP62304 92 aaKnown RBP16.21■□□□□ 0.19
LONRF3-204ENST00000439603 A0A096LPF7 62 aa16.2■□□□□ 0.18
LONRF3-204ENST00000439603 ESDP10768 282 aa16.2■□□□□ 0.18
LONRF3-204ENST00000439603 COTL1Q14019 142 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms