RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 NUP35Q8NFH5 326 aa13.26□□□□□ -0.29
SEMA3B-206ENST00000439487 A0A1B0GUT8 65 aa13.25□□□□□ -0.29
SEMA3B-206ENST00000439487 M0QY20 66 aa13.25□□□□□ -0.29
SEMA3B-206ENST00000439487 UQCC3Q6UW78 93 aa13.25□□□□□ -0.29
SEMA3B-206ENST00000439487 SMIM15Q7Z3B0 74 aa13.25□□□□□ -0.29
SEMA3B-206ENST00000439487 C6orf223Q8N319 242 aa13.25□□□□□ -0.29
SEMA3B-206ENST00000439487 IGHV3-38A0A0C4DH36 116 aa13.24□□□□□ -0.29
SEMA3B-206ENST00000439487 COMMD7Q86VX2 200 aa13.24□□□□□ -0.29
SEMA3B-206ENST00000439487 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
SEMA3B-206ENST00000439487 SMIM27A0A1W2PRY6 76 aa13.23□□□□□ -0.29
SEMA3B-206ENST00000439487 H7C1H1 209 aa13.23□□□□□ -0.29
SEMA3B-206ENST00000439487 DNAH10OSP0CZ25 163 aa13.23□□□□□ -0.29
SEMA3B-206ENST00000439487 PNRC1Q12796 327 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-206ENST00000439487 RASL11AQ6T310 242 aa13.22□□□□□ -0.29
SEMA3B-206ENST00000439487 TNFRSF18Q9Y5U5 241 aa13.22□□□□□ -0.29
SEMA3B-206ENST00000439487 RYR1P21817 5038 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 TRAV9-2A0A087WT02 112 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 A0A087WWC5 75 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 TRAV26-2A0A0B4J265 109 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 TMEM218A2RU14 115 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 ADCYAP1P18509 176 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 RIGQ13278 110 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 LINC00336Q6ZUF6 198 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 GATD1Q8NB37 220 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 DNAJC30Q96LL9 226 aa13.21□□□□□ -0.29
SEMA3B-206ENST00000439487 LINC00862A6NCI5 91 aa13.2□□□□□ -0.3
SEMA3B-206ENST00000439487 IGHV3-30P01768 117 aa13.2□□□□□ -0.3
SEMA3B-206ENST00000439487 IGHV3-33P01772 117 aa13.2□□□□□ -0.3
SEMA3B-206ENST00000439487 IGHV3-30-3P0DP02 117 aa13.2□□□□□ -0.3
SEMA3B-206ENST00000439487 IGHV3-30-5P0DP03 117 aa13.2□□□□□ -0.3
SEMA3B-206ENST00000439487 LINC01556Q5JQF7 62 aa13.2□□□□□ -0.3
SEMA3B-206ENST00000439487 PRSS29PA6NIE9 313 aa13.19□□□□□ -0.3
SEMA3B-206ENST00000439487 F8W036 122 aa13.19□□□□□ -0.3
SEMA3B-206ENST00000439487 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
SEMA3B-206ENST00000439487 TMEM191AQ9H0A3 160 aa13.19□□□□□ -0.3
SEMA3B-206ENST00000439487 NIT2Q9NQR4 276 aa13.19□□□□□ -0.3
SEMA3B-206ENST00000439487 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
SEMA3B-206ENST00000439487 Q8N3U1 123 aa13.18□□□□□ -0.3
SEMA3B-206ENST00000439487 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.18□□□□□ -0.3
SEMA3B-206ENST00000439487 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
SEMA3B-206ENST00000439487 MT-ND4LP03901 98 aa13.17□□□□□ -0.3
SEMA3B-206ENST00000439487 PKD1P98161 4303 aa13.17□□□□□ -0.3
SEMA3B-206ENST00000439487 TRBV6-8A0A0A6YYG3 113 aa13.16□□□□□ -0.3
SEMA3B-206ENST00000439487 K7EP13 123 aa13.16□□□□□ -0.3
SEMA3B-206ENST00000439487 NTM-AS1Q6ZSK4 140 aa13.16□□□□□ -0.3
SEMA3B-206ENST00000439487 C10orf126Q8N4M7 172 aa13.16□□□□□ -0.3
SEMA3B-206ENST00000439487 ANAPC16Q96DE5 110 aa13.16□□□□□ -0.3
SEMA3B-206ENST00000439487 RPL39LQ96EH5 51 aaKnown RBP13.16□□□□□ -0.3
SEMA3B-206ENST00000439487 RNF185Q96GF1 192 aa13.16□□□□□ -0.3
SEMA3B-206ENST00000439487 DNAH11Q96DT5 4516 aa13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 BTF3P20290 206 aaKnown RBP13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 RAB4AP20338 218 aa13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 CAMPP49913 170 aa13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 TNP2Q05952 138 aa13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 AMN1Q8IY45 258 aa13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 SEC11CQ9BY50 192 aa13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 HECTD4Q9Y4D8 3996 aa13.15□□□□□ -0.3
SEMA3B-206ENST00000439487 GAS8-AS1O95177 125 aa13.14□□□□□ -0.31
SEMA3B-206ENST00000439487 MRPL54Q6P161 138 aaKnown RBP13.14□□□□□ -0.31
SEMA3B-206ENST00000439487 NIT1Q86X76 327 aa13.14□□□□□ -0.31
SEMA3B-206ENST00000439487 DEFB104AQ8WTQ1 72 aa13.14□□□□□ -0.31
SEMA3B-206ENST00000439487 FRZBQ92765 325 aa13.14□□□□□ -0.31
SEMA3B-206ENST00000439487 TMEM97Q5BJF2 176 aa13.13□□□□□ -0.31
SEMA3B-206ENST00000439487 IBA57-AS1B1ANH7 110 aa13.12□□□□□ -0.31
SEMA3B-206ENST00000439487 Q6ZRN7 208 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-206ENST00000439487 URGCP-MRPS24S4R325 110 aa13.12□□□□□ -0.31
SEMA3B-206ENST00000439487 A0A1B0GVY2 172 aa13.11□□□□□ -0.31
SEMA3B-206ENST00000439487 A0A1B0GW15 77 aa13.11□□□□□ -0.31
SEMA3B-206ENST00000439487 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
SEMA3B-206ENST00000439487 KCNIP4Q6PIL6 250 aa13.11□□□□□ -0.31
SEMA3B-206ENST00000439487 CHCHD5Q9BSY4 110 aa13.11□□□□□ -0.31
SEMA3B-206ENST00000439487 TRBV25-1A0A075B6N4 114 aa13.1□□□□□ -0.31
SEMA3B-206ENST00000439487 A0A1B0GXF2 115 aa13.1□□□□□ -0.31
SEMA3B-206ENST00000439487 SMKR1H3BMG3 65 aa13.1□□□□□ -0.31
SEMA3B-206ENST00000439487 HBBP68871 147 aa13.1□□□□□ -0.31
SEMA3B-206ENST00000439487 FAM104BQ5XKR9 115 aa13.1□□□□□ -0.31
SEMA3B-206ENST00000439487 NFE4Q86UQ8 179 aa13.1□□□□□ -0.31
SEMA3B-206ENST00000439487 MRAP2Q96G30 205 aa13.1□□□□□ -0.31
SEMA3B-206ENST00000439487 A0A087WX48 190 aa13.09□□□□□ -0.31
SEMA3B-206ENST00000439487 IGHV1-24A0A0C4DH33 117 aa13.09□□□□□ -0.31
SEMA3B-206ENST00000439487 NCR2O95944 276 aa13.09□□□□□ -0.31
SEMA3B-206ENST00000439487 RPS10P46783 165 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-206ENST00000439487 IQCJQ1A5X6 159 aa13.09□□□□□ -0.31
SEMA3B-206ENST00000439487 C10orf91Q5T1B1 145 aa13.09□□□□□ -0.31
SEMA3B-206ENST00000439487 Q9HAA7 133 aa13.09□□□□□ -0.31
SEMA3B-206ENST00000439487 TRBV6-5A0A0K0K1A5 114 aa13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 SDHAF1A6NFY7 115 aa13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 S100A8P05109 93 aa13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 GAGE6Q13070 117 aa13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 COTL1Q14019 142 aa13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 MRPL51Q4U2R6 128 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 PKHD1P08F94 4074 aa13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 DYNC1H1Q14204 4646 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-206ENST00000439487 MPV17L2Q567V2 206 aa13.07□□□□□ -0.32
SEMA3B-206ENST00000439487 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
SEMA3B-206ENST00000439487 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
SEMA3B-206ENST00000439487 KLK12Q9UKR0 248 aa13.07□□□□□ -0.32
SEMA3B-206ENST00000439487 ATRAIDQ6UW56 229 aa13.06□□□□□ -0.32
SEMA3B-206ENST00000439487 CTDSP1Q9GZU7 261 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms