RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 C9JAW5 83 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 RHODO00212 210 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 LGALS3P17931 250 aaKnown RBP6.45□□□□□ -1.38
HPS4-206ENST00000439453 PAPPA-AS1Q5QFB9 102 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 ODF3BA8MYP8 253 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 TSHBP01222 138 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 ASIPP42127 132 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 TSPEAR-AS2P59090 65 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 IGHV7-81A0A0B4J1V7 117 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 INAFM1C9JVW0 142 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 M0QXV9 152 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 IGF1P05019 195 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 TIMD4Q96H15 378 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 CRIP2P52943 208 aaPredicted RBP6.44□□□□□ -1.38
HPS4-206ENST00000439453 Q8N6K4 173 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 SONP18583 2426 aaKnown RBP6.44□□□□□ -1.38
HPS4-206ENST00000439453 IGKV3-7A0A075B6H7 116 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 AVPP01185 164 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 NDUFV3P56181 108 aaKnown RBP6.44□□□□□ -1.38
HPS4-206ENST00000439453 TRPT1Q86TN4 253 aaKnown RBP6.44□□□□□ -1.38
HPS4-206ENST00000439453 PHLDA3Q9Y5J5 127 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 GAGE12JA6NER3 117 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 GAGE7O76087 117 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 GAGE12FP0CL80 117 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 GAGE12GP0CL81 117 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 GAGE12IP0CL82 117 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 GAGE4Q13068 117 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 PMVKQ15126 192 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 CLEC19AQ6UXS0 136 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 GPHB5Q86YW7 130 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 RAX2Q96IS3 184 aa6.44□□□□□ -1.38
HPS4-206ENST00000439453 IGHV1-69DA0A0B4J2H0 117 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 LINC01356Q8N9X3 169 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 FAM110DQ8TAY7 271 aaPredicted RBP6.43□□□□□ -1.38
HPS4-206ENST00000439453 METTL26Q96S19 204 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 TP53TG1Q9Y2A0 90 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 TRAV4A0A0B4J268 109 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 IGIPA6NJ69 53 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 PPP1R17O96001 155 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 C16orf92Q96LL3 132 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 TRAV8-4A0A0B4J246 113 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 FSHBP01225 129 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 ECSCRQ19T08 205 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 CFAP161Q6P656 301 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 AMELXQ99217 191 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 LENEPQ9Y5L5 61 aa6.43□□□□□ -1.38
HPS4-206ENST00000439453 TRAV21A0A0B4J279 112 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 A4D1N5 150 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 CRLF1O75462 422 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 IGHV3-33P01772 117 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 MSMBP08118 114 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 DEFB104AQ8WTQ1 72 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 CCDC140Q96MF4 163 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 CCDC179H3BU77 68 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 M0R1W7 72 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 EIF4EBP3O60516 100 aaPredicted RBP6.42□□□□□ -1.38
HPS4-206ENST00000439453 VMO1Q7Z5L0 202 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 Q8N1Y9 231 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 ZFAND2AQ8N6M9 145 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 NTN5Q8WTR8 489 aaPredicted RBP6.42□□□□□ -1.38
HPS4-206ENST00000439453 C20orf173Q96LM9 149 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 J3QQQ9 107 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 EBI3Q14213 229 aa6.42□□□□□ -1.38
HPS4-206ENST00000439453 TMEM263Q8WUH6 116 aaKnown RBP6.42□□□□□ -1.38
HPS4-206ENST00000439453 B4DSR2 109 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 IFITM1P13164 125 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 RPL39P62891 51 aaKnown RBP6.41□□□□□ -1.38
HPS4-206ENST00000439453 PRIMA1Q86XR5 153 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 Q8N9W7 124 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 ZNRF2Q8NHG8 242 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 TMEM141Q96I45 108 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 TRAV2A0A0B4J234 112 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 P0DMU3 169 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 FAM231AP0DMU4 169 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 FAM231CP0DMU5 169 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 HERV-K104P63124 156 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 TMEM95Q3KNT9 176 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 LINC00477Q96M19 166 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 U3KQE9 123 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 MED14OSP0DP75 135 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 Q6Q795 121 aa6.41□□□□□ -1.38
HPS4-206ENST00000439453 GNRH2O43555 120 aa6.4□□□□□ -1.38
HPS4-206ENST00000439453 RPL32P62910 135 aaKnown RBP6.4□□□□□ -1.38
HPS4-206ENST00000439453 C9orf139Q6ZV77 190 aa6.4□□□□□ -1.38
HPS4-206ENST00000439453 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.38
HPS4-206ENST00000439453 YAE1D1Q9NRH1 226 aa6.4□□□□□ -1.38
HPS4-206ENST00000439453 HIVEP2P31629 2446 aa6.4□□□□□ -1.38
HPS4-206ENST00000439453 A0A0B4J2C4 111 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 TRBV7-9A0A0J9YWB2 115 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 ATP6V0E1O15342 81 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 ATXN8Q156A1 80 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 KLK9Q2XQG4 91 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 ZNF876PQ49A33 203 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 LINC01620Q4KN68 170 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 EEF1AKMT3Q96AZ1 226 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 TIMM17AQ99595 171 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 KLK9Q9UKQ9 250 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 OOSP1A8MZH6 123 aa6.4□□□□□ -1.39
HPS4-206ENST00000439453 OR10J6PQ8NGY7 276 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms