RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 Q8N6K4 173 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 ZFAND3Q9H8U3 227 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 PRO0461Q9UI25 63 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 TRBV7-1A0A0A6YYK4 115 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 SMPXQ9UHP9 88 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 TEX15Q9BXT5 2789 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 IGHV3OR16-12A0A075B7B8 117 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 IGHV3-38A0A0C4DH36 116 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 A0A0J9YXV3 536 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 CLPSL1A2RUU4 121 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 AVPP01185 164 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 SYNJ2BPP57105 145 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 DEFB136Q30KP8 78 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 TEN1Q86WV5 123 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 NDUFA11Q86Y39 141 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 C15orf53Q8NAA6 179 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 VPS13CQ709C8 3753 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 CFC1P0CG37 223 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 P0DMU3 169 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 FAM231AP0DMU4 169 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 FAM231CP0DMU5 169 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
CDC42SE1-202ENST00000439374 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
CDC42SE1-202ENST00000439374 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
CDC42SE1-202ENST00000439374 SHISA2Q6UWI4 295 aa7.49□□□□□ -1.21
CDC42SE1-202ENST00000439374 MUSTN1Q8IVN3 82 aa7.49□□□□□ -1.21
CDC42SE1-202ENST00000439374 IGHV7-4-1A0A0J9YVY3 117 aa7.49□□□□□ -1.21
CDC42SE1-202ENST00000439374 MSMBP08118 114 aa7.49□□□□□ -1.21
CDC42SE1-202ENST00000439374 PRO1854Q9UHT4 67 aa7.49□□□□□ -1.21
CDC42SE1-202ENST00000439374 A0A1W2PRX2 142 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 J3QQQ9 107 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 SPINK13Q1W4C9 94 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 C2orf82Q6UX34 121 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 CHCHD5Q9BSY4 110 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 NF1P21359 2839 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 FBN2P35556 2912 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 DEFB112Q30KQ8 113 aa7.48□□□□□ -1.21
CDC42SE1-202ENST00000439374 MUC4Q99102 2169 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 TRAV21A0A0B4J279 112 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 IGHV3-16A0A0C4DH30 117 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 GAGE5Q13069 117 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 GAGE6Q13070 117 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 ZNF876PQ49A33 203 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 ZMAT4Q9H898 229 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 A0A0J9YY99 117 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 EBI3Q14213 229 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 LINC01559Q495D7 138 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 LYRM7Q5U5X0 104 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 ZNF575Q86XF7 245 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
CDC42SE1-202ENST00000439374 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
CDC42SE1-202ENST00000439374 C10orf126Q8N4M7 172 aa7.46□□□□□ -1.22
CDC42SE1-202ENST00000439374 ZNRF2Q8NHG8 242 aa7.46□□□□□ -1.22
CDC42SE1-202ENST00000439374 HECTD1Q9ULT8 2610 aa7.46□□□□□ -1.22
CDC42SE1-202ENST00000439374 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
CDC42SE1-202ENST00000439374 Q8N1Y9 231 aa7.46□□□□□ -1.22
CDC42SE1-202ENST00000439374 CHD6Q8TD26 2715 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 PROK1P58294 105 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 SCGB1A1P11684 91 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 TCTEX1D4Q5JR98 221 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 SUMO4Q6EEV6 95 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 C10orf105Q8TEF2 133 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 VCX2Q9H322 139 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 DAZ1Q9NQZ3 744 aaKnown RBP7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 MDFICQ9P1T7 246 aa7.45□□□□□ -1.22
CDC42SE1-202ENST00000439374 HOXD3P31249 432 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 FLNAP21333 2647 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 GAGE12JA6NER3 117 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 B4DSR2 109 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 GAGE7O76087 117 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 GAGE12GP0CL81 117 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 GAGE12IP0CL82 117 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 CD28P10747 220 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 ID1P41134 155 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 GAGE4Q13068 117 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 PMVKQ15126 192 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 HIST2H2BCQ6DN03 193 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
CDC42SE1-202ENST00000439374 FAM223BA6NKX1 122 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 IFITM1P13164 125 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 FAM223AQ8IWN6 122 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 COX6B1P14854 86 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 NDUFV3P56181 108 aaKnown RBP7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 TAL2Q16559 108 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 OVOL1O14753 267 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 Q9UF83 564 aa7.43□□□□□ -1.22
CDC42SE1-202ENST00000439374 NDUFA4O00483 81 aa7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 CRYGDP07320 174 aa7.42□□□□□ -1.22
CDC42SE1-202ENST00000439374 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms