RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 LEPROTO15243 131 aa9.32□□□□□ -0.92
TCOF1-205ENST00000439160 Q6ZSV7 163 aa9.32□□□□□ -0.92
TCOF1-205ENST00000439160 SMAD5-AS1Q9Y6J3 95 aa9.32□□□□□ -0.92
TCOF1-205ENST00000439160 AMTNQ6UX39 209 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 A0A1B0GXF2 115 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 K7EMI3 77 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 DEFB4AO15263 64 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
TCOF1-205ENST00000439160 TRAV25A0A0B4J276 109 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 INAFM1C9JVW0 142 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 NXPH4O95158 308 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 TTTY13Q9BZ97 58 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 MAP6D1Q9H9H5 199 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 PSCAO43653 123 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 K7EQG2 157 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 DEFB135Q30KP9 77 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 MBD6Q96DN6 1003 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 TP53TG3Q9ULZ0 132 aa9.3□□□□□ -0.92
TCOF1-205ENST00000439160 A0A0J9YXV3 536 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 CRIP1P50238 77 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 ATXN8Q156A1 80 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 LINC01545Q5VT33 79 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 Q6ZQT7 251 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 C16orf74Q96GX8 76 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 TSPAN13O95857 204 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 TRIOO75962 3097 aa9.29□□□□□ -0.92
TCOF1-205ENST00000439160 H3BMG7 143 aa9.28□□□□□ -0.92
TCOF1-205ENST00000439160 GYPEP15421 78 aa9.28□□□□□ -0.92
TCOF1-205ENST00000439160 XCL1P47992 114 aa9.28□□□□□ -0.92
TCOF1-205ENST00000439160 CRLF1O75462 422 aa9.28□□□□□ -0.92
TCOF1-205ENST00000439160 TRAV8-3A0A0A6YYJ7 113 aa9.28□□□□□ -0.92
TCOF1-205ENST00000439160 K7EP34 96 aa9.28□□□□□ -0.92
TCOF1-205ENST00000439160 HERVK_113P63121 156 aa9.28□□□□□ -0.92
TCOF1-205ENST00000439160 A0A1W2PPM0 123 aa9.27□□□□□ -0.92
TCOF1-205ENST00000439160 ZNF561-AS1K7EIQ3 104 aa9.27□□□□□ -0.92
TCOF1-205ENST00000439160 PSMB8P28062 276 aa9.27□□□□□ -0.92
TCOF1-205ENST00000439160 IGLC6P0CF74 106 aa9.27□□□□□ -0.93
TCOF1-205ENST00000439160 DEFB114Q30KQ6 69 aa9.27□□□□□ -0.93
TCOF1-205ENST00000439160 C9JAW5 83 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 K7EQD1 137 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 C5orf38Q86SI9 138 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 H3BMM0 161 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 CENPEQ02224 2701 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 ADAMTS20P59510 1910 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 RAI1Q7Z5J4 1906 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-205ENST00000439160 LGALS9O00182 355 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 ANAPC13Q9BS18 74 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 ZNF702PQ9H963 129 aa9.26□□□□□ -0.93
TCOF1-205ENST00000439160 TAX1BP3O14907 124 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 ZFAND2AQ8N6M9 145 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 ATP6V0E2Q8NHE4 81 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 BPTFQ12830 3046 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 C18orf65Q6ZTR6 163 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 CEND1Q8N111 149 aa9.25□□□□□ -0.93
TCOF1-205ENST00000439160 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 ATP5G1P05496 136 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 P0DMU3 169 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-205ENST00000439160 Q9H8V8 135 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 SCRT2Q9NQ03 307 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 IGLV10-54A0A075B6I4 117 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 UBE2WQ96B02 151 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
TCOF1-205ENST00000439160 C10orf126Q8N4M7 172 aa9.23□□□□□ -0.93
TCOF1-205ENST00000439160 OPRPNQ99935 248 aaPredicted RBP9.23□□□□□ -0.93
TCOF1-205ENST00000439160 PRO1854Q9UHT4 67 aa9.23□□□□□ -0.93
TCOF1-205ENST00000439160 FGF6P10767 208 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 LINC01006Q8NI28 216 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 HHLA3Q9XRX5 114 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 COL6A3P12111 3177 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 SIVA1O15304 175 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 GAGE2BQ13066 116 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 DAZ2Q13117 558 aaKnown RBP9.22□□□□□ -0.93
TCOF1-205ENST00000439160 GAGE2EQ4V326 116 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 Q6ZTI0 123 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
TCOF1-205ENST00000439160 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
TCOF1-205ENST00000439160 GAGE2DQ9UEU5 116 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 WDFY4Q6ZS81 3184 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 GHRHP01286 108 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 PLA2G2AP14555 144 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 TMEM263Q8WUH6 116 aaKnown RBP9.22□□□□□ -0.93
TCOF1-205ENST00000439160 LY6G6DO95868 133 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 IGLV1-40P01703 118 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 SH2D6Q7Z4S9 175 aa9.22□□□□□ -0.93
TCOF1-205ENST00000439160 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.93
TCOF1-205ENST00000439160 CEMP1Q6PRD7 247 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms