RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 C2orf82Q6UX34 121 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 TMEM190Q8WZ59 177 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 MDFICQ9P1T7 246 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 P0DMU3 169 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 FAM231AP0DMU4 169 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 FAM231CP0DMU5 169 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 UBE2E1P51965 193 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
ACTN1-204ENST00000438964 LY6EQ16553 131 aa9.99□□□□□ -0.81
ACTN1-204ENST00000438964 CCL21O00585 134 aa9.99□□□□□ -0.81
ACTN1-204ENST00000438964 ZNF22P17026 224 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-204ENST00000438964 ZNF876PQ49A33 203 aa9.99□□□□□ -0.81
ACTN1-204ENST00000438964 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
ACTN1-204ENST00000438964 BRD3OSQ6XYD6 125 aa9.99□□□□□ -0.81
ACTN1-204ENST00000438964 ITLN2Q8WWU7 325 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-204ENST00000438964 USP9YO00507 2555 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-204ENST00000438964 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
ACTN1-204ENST00000438964 FOXC1Q12948 553 aa9.98□□□□□ -0.81
ACTN1-204ENST00000438964 PIP4P1Q86T03 277 aa9.98□□□□□ -0.81
ACTN1-204ENST00000438964 H3BMM0 161 aa9.98□□□□□ -0.81
ACTN1-204ENST00000438964 UBE2WQ96B02 151 aa9.98□□□□□ -0.81
ACTN1-204ENST00000438964 Q9UF83 564 aa9.98□□□□□ -0.81
ACTN1-204ENST00000438964 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
ACTN1-204ENST00000438964 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
ACTN1-204ENST00000438964 VCYO14598 125 aa9.97□□□□□ -0.81
ACTN1-204ENST00000438964 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
ACTN1-204ENST00000438964 PROK1P58294 105 aa9.96□□□□□ -0.81
ACTN1-204ENST00000438964 ZNF625Q96I27 306 aaPredicted RBP9.96□□□□□ -0.81
ACTN1-204ENST00000438964 UTP20O75691 2785 aaKnown RBP9.96□□□□□ -0.81
ACTN1-204ENST00000438964 MYO9AB2RTY4 2548 aa9.96□□□□□ -0.81
ACTN1-204ENST00000438964 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
ACTN1-204ENST00000438964 ABCA2Q9BZC7 2435 aa9.96□□□□□ -0.82
ACTN1-204ENST00000438964 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
ACTN1-204ENST00000438964 H7C423 109 aa9.96□□□□□ -0.82
ACTN1-204ENST00000438964 ITPR1Q14643 2758 aa9.95□□□□□ -0.82
ACTN1-204ENST00000438964 KNCNA6PVL3 124 aa9.95□□□□□ -0.82
ACTN1-204ENST00000438964 M0R1W7 72 aa9.95□□□□□ -0.82
ACTN1-204ENST00000438964 POLQO75417 2590 aa9.95□□□□□ -0.82
ACTN1-204ENST00000438964 CENPVL3A0A0U1RRI6 287 aa9.95□□□□□ -0.82
ACTN1-204ENST00000438964 WNK1Q9H4A3 2382 aa9.95□□□□□ -0.82
ACTN1-204ENST00000438964 RS1O15537 224 aa9.94□□□□□ -0.82
ACTN1-204ENST00000438964 BRI3O95415 125 aa9.94□□□□□ -0.82
ACTN1-204ENST00000438964 IGHV3-30-3P0DP02 117 aa9.94□□□□□ -0.82
ACTN1-204ENST00000438964 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
ACTN1-204ENST00000438964 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
ACTN1-204ENST00000438964 RHPN1-AS1Q9BWJ2 59 aa9.94□□□□□ -0.82
ACTN1-204ENST00000438964 U3KQE9 123 aa9.94□□□□□ -0.82
ACTN1-204ENST00000438964 TRAV41A0A0B4J266 112 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 PF4V1P10720 104 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 SPTBN4Q9H254 2564 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 LEPROTO15243 131 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 MINOS1Q5TGZ0 78 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 ICOSQ9Y6W8 199 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 TRBV10-2A0A0K0K1G8 114 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 LGALS9O00182 355 aa9.93□□□□□ -0.82
ACTN1-204ENST00000438964 JMJD1CQ15652 2540 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 EBI3Q14213 229 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 SPINK13Q1W4C9 94 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 MRPL53Q96EL3 112 aaKnown RBP9.92□□□□□ -0.82
ACTN1-204ENST00000438964 TMEM141Q96I45 108 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.82
ACTN1-204ENST00000438964 IGHV1-69DA0A0B4J2H0 117 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 A0A1W2PPR1 153 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 SOCS3O14543 225 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 TMEM95Q3KNT9 176 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
ACTN1-204ENST00000438964 OVOL1O14753 267 aa9.91□□□□□ -0.82
ACTN1-204ENST00000438964 CD28P10747 220 aa9.91□□□□□ -0.82
ACTN1-204ENST00000438964 TIMM21Q9BVV7 248 aa9.91□□□□□ -0.82
ACTN1-204ENST00000438964 IGHV3-38A0A0C4DH36 116 aa9.91□□□□□ -0.82
ACTN1-204ENST00000438964 CFAP161Q6P656 301 aa9.91□□□□□ -0.82
ACTN1-204ENST00000438964 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-204ENST00000438964 TLN2Q9Y4G6 2542 aa9.91□□□□□ -0.82
ACTN1-204ENST00000438964 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.82
ACTN1-204ENST00000438964 FAM236AA0A1B0GUQ0 79 aa9.9□□□□□ -0.82
ACTN1-204ENST00000438964 FAM236BA0A1B0GV22 79 aa9.9□□□□□ -0.82
ACTN1-204ENST00000438964 C5orf56Q8N8D9 126 aa9.9□□□□□ -0.82
ACTN1-204ENST00000438964 SIRPDQ9H106 197 aa9.9□□□□□ -0.82
ACTN1-204ENST00000438964 A0A0B4J2C4 111 aa9.9□□□□□ -0.82
ACTN1-204ENST00000438964 I3L3M4 83 aa9.9□□□□□ -0.83
ACTN1-204ENST00000438964 M0QY20 66 aa9.9□□□□□ -0.83
ACTN1-204ENST00000438964 M0R2P5 195 aa9.9□□□□□ -0.83
ACTN1-204ENST00000438964 RPL13AP40429 203 aaKnown RBP9.9□□□□□ -0.83
ACTN1-204ENST00000438964 MRPL23Q16540 153 aaKnown RBP9.9□□□□□ -0.83
ACTN1-204ENST00000438964 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.83
ACTN1-204ENST00000438964 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.83
ACTN1-204ENST00000438964 TRGV11A0A075B6L2 103 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 IGHV4OR15-8A0A075B7B6 117 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 A0A087WW49 117 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 TRBV27A0A0K0K1C4 114 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 PPP1R17O96001 155 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 BLCAPP62952 87 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 FBN2P35556 2912 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 MINOS1-NBL1R4GNA1 71 aa9.89□□□□□ -0.83
ACTN1-204ENST00000438964 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-204ENST00000438964 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-204ENST00000438964 LITAFQ99732 161 aa9.88□□□□□ -0.83
ACTN1-204ENST00000438964 BPESC1Q9GZL8 116 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms