RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 CEMP1Q6PRD7 247 aaPredicted RBP13.52□□□□□ -0.24
KCNC4-204ENST00000438661 FAM110DQ8TAY7 271 aaPredicted RBP13.52□□□□□ -0.24
KCNC4-204ENST00000438661 RNASE13Q5GAN3 156 aaKnown RBP13.52□□□□□ -0.25
KCNC4-204ENST00000438661 EEF1AKMT3Q96AZ1 226 aa13.52□□□□□ -0.25
KCNC4-204ENST00000438661 MRPL53Q96EL3 112 aaKnown RBP13.52□□□□□ -0.25
KCNC4-204ENST00000438661 YAE1D1Q9NRH1 226 aa13.52□□□□□ -0.25
KCNC4-204ENST00000438661 TRBV30A0A0K0K1B3 111 aa13.51□□□□□ -0.25
KCNC4-204ENST00000438661 ODF3BA8MYP8 253 aa13.51□□□□□ -0.25
KCNC4-204ENST00000438661 COX6CP09669 75 aa13.51□□□□□ -0.25
KCNC4-204ENST00000438661 A8MZ25 164 aa13.51□□□□□ -0.25
KCNC4-204ENST00000438661 ADAMTSL4-AS1Q5T5F5 129 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 UNQ9165/PRO28630Q6UXU0 137 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 TRAV12-3A0A0B4J271 114 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 LINC00694P0DN24 101 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 CDSNQ15517 529 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 C9orf139Q6ZV77 190 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 LOC107984640A0A0U1RRK4 108 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 OOSP1A8MZH6 123 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 DAND5Q8N907 189 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 LINC01587Q99440 93 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 KIF25-AS1Q9Y6Z4 181 aa13.5□□□□□ -0.25
KCNC4-204ENST00000438661 Q8N6K4 173 aa13.49□□□□□ -0.25
KCNC4-204ENST00000438661 DUX5Q96PT3 197 aa13.49□□□□□ -0.25
KCNC4-204ENST00000438661 IGHV3-30-3P0DP02 117 aa13.48□□□□□ -0.25
KCNC4-204ENST00000438661 MRPL23Q16540 153 aaKnown RBP13.48□□□□□ -0.25
KCNC4-204ENST00000438661 ITLN2Q8WWU7 325 aaPredicted RBP13.48□□□□□ -0.25
KCNC4-204ENST00000438661 IGKV3-20P01619 116 aa13.48□□□□□ -0.25
KCNC4-204ENST00000438661 TRBV12-3P01733 135 aa13.48□□□□□ -0.25
KCNC4-204ENST00000438661 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
KCNC4-204ENST00000438661 A0A087WW49 117 aa13.47□□□□□ -0.25
KCNC4-204ENST00000438661 C9orf153Q5TBE3 101 aa13.47□□□□□ -0.25
KCNC4-204ENST00000438661 LENEPQ9Y5L5 61 aa13.47□□□□□ -0.25
KCNC4-204ENST00000438661 KLK5Q9Y337 293 aaPredicted RBP13.47□□□□□ -0.25
KCNC4-204ENST00000438661 M0R1W7 72 aa13.47□□□□□ -0.25
KCNC4-204ENST00000438661 TMEM101Q96IK0 257 aa13.47□□□□□ -0.25
KCNC4-204ENST00000438661 TIMM21Q9BVV7 248 aa13.47□□□□□ -0.25
KCNC4-204ENST00000438661 I3L3M4 83 aa13.46□□□□□ -0.26
KCNC4-204ENST00000438661 TMEM219Q86XT9 240 aa13.46□□□□□ -0.26
KCNC4-204ENST00000438661 OVOL1O14753 267 aa13.45□□□□□ -0.26
KCNC4-204ENST00000438661 IGHV3-11P01762 117 aa13.45□□□□□ -0.26
KCNC4-204ENST00000438661 TMEM126AQ9H061 195 aa13.45□□□□□ -0.26
KCNC4-204ENST00000438661 ZFP36P26651 326 aaKnown RBP13.45□□□□□ -0.26
KCNC4-204ENST00000438661 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.26
KCNC4-204ENST00000438661 TRBV27A0A0K0K1C4 114 aa13.44□□□□□ -0.26
KCNC4-204ENST00000438661 A0A0U1RRA0 63 aa13.44□□□□□ -0.26
KCNC4-204ENST00000438661 PTPRQQ9UMZ3 2332 aa13.44□□□□□ -0.26
KCNC4-204ENST00000438661 H3BT86 120 aa13.44□□□□□ -0.26
KCNC4-204ENST00000438661 U3KQE9 123 aa13.44□□□□□ -0.26
KCNC4-204ENST00000438661 TRBV7-1A0A0A6YYK4 115 aa13.44□□□□□ -0.26
KCNC4-204ENST00000438661 CCL21O00585 134 aa13.44□□□□□ -0.26
KCNC4-204ENST00000438661 NDUFA12Q9UI09 145 aa13.43□□□□□ -0.26
KCNC4-204ENST00000438661 TRAV12-2A0A075B6T6 113 aa13.42□□□□□ -0.26
KCNC4-204ENST00000438661 SPANXA1Q9NS26 97 aa13.42□□□□□ -0.26
KCNC4-204ENST00000438661 IGLV4-3A0A075B6K6 122 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 IGHV3-73A0A0B4J1V6 119 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 ATP5J2P56134 94 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 LITAFQ99732 161 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 LST1O00453 97 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 CD28P10747 220 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 NACAE9PAV3 2078 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 EBI3Q14213 229 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
KCNC4-204ENST00000438661 CUBNO60494 3623 aa13.4□□□□□ -0.26
KCNC4-204ENST00000438661 C20orf203Q8NBC4 194 aa13.4□□□□□ -0.26
KCNC4-204ENST00000438661 TRAV41A0A0B4J266 112 aa13.4□□□□□ -0.26
KCNC4-204ENST00000438661 MED14OSP0DP75 135 aa13.4□□□□□ -0.26
KCNC4-204ENST00000438661 MINOS1Q5TGZ0 78 aa13.4□□□□□ -0.26
KCNC4-204ENST00000438661 ATRXP46100 2492 aa13.39□□□□□ -0.27
KCNC4-204ENST00000438661 TRBV7-7A0A0K0K1E9 115 aa13.39□□□□□ -0.27
KCNC4-204ENST00000438661 M0QY20 66 aa13.39□□□□□ -0.27
KCNC4-204ENST00000438661 IGHV1-69P01742 117 aa13.39□□□□□ -0.27
KCNC4-204ENST00000438661 HTN1P15515 57 aa13.39□□□□□ -0.27
KCNC4-204ENST00000438661 IGHV3OR16-10A0A075B7F0 116 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 HERVK_113P63121 156 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 POM121L12Q8N7R1 296 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 SMCR5Q8TEV8 140 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 K7ENP7 123 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 ZNF625Q96I27 306 aaPredicted RBP13.38□□□□□ -0.27
KCNC4-204ENST00000438661 KLK9Q9UKQ9 250 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 FAM240AA0A1B0GVK7 77 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 RS1O15537 224 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 SAA4P35542 130 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 FBXL19-AS1Q494R0 122 aa13.38□□□□□ -0.27
KCNC4-204ENST00000438661 NDUFA7O95182 113 aa13.37□□□□□ -0.27
KCNC4-204ENST00000438661 C11orf71Q6IPW1 123 aa13.37□□□□□ -0.27
KCNC4-204ENST00000438661 SOCS3O14543 225 aa13.37□□□□□ -0.27
KCNC4-204ENST00000438661 NPFFO15130 113 aa13.37□□□□□ -0.27
KCNC4-204ENST00000438661 EDN2P20800 178 aa13.37□□□□□ -0.27
KCNC4-204ENST00000438661 CSDC2Q9Y534 153 aaKnown RBP13.37□□□□□ -0.27
KCNC4-204ENST00000438661 MINOS1-NBL1R4GNA1 71 aa13.37□□□□□ -0.27
KCNC4-204ENST00000438661 DOPEY2Q9Y3R5 2298 aa13.37□□□□□ -0.27
KCNC4-204ENST00000438661 NXPH4O95158 308 aa13.36□□□□□ -0.27
KCNC4-204ENST00000438661 C3orf22Q8N5N4 141 aa13.36□□□□□ -0.27
KCNC4-204ENST00000438661 MIAQ16674 131 aa13.36□□□□□ -0.27
KCNC4-204ENST00000438661 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
KCNC4-204ENST00000438661 ADORA2A-AS1P86434 159 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 NSUN5P1Q3KNT7 163 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 RHPN1-AS1Q9BWJ2 59 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 C2CD3Q4AC94 2353 aa13.35□□□□□ -0.27
KCNC4-204ENST00000438661 A0A0J9YX75 114 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms