RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 TOMM6Q96B49 74 aa11.13□□□□□ -0.63
SGCE-205ENST00000437425 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
SGCE-205ENST00000437425 ZMAT5Q9UDW3 170 aaKnown RBP11.13□□□□□ -0.63
SGCE-205ENST00000437425 AZU1P20160 251 aa11.12□□□□□ -0.63
SGCE-205ENST00000437425 RHOHQ15669 191 aa11.12□□□□□ -0.63
SGCE-205ENST00000437425 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
SGCE-205ENST00000437425 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
SGCE-205ENST00000437425 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.11□□□□□ -0.63
SGCE-205ENST00000437425 IGHV3-53P01767 116 aa11.11□□□□□ -0.63
SGCE-205ENST00000437425 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
SGCE-205ENST00000437425 LINC00587B1AMM8 73 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 H0Y8G0 127 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 I3L3M4 83 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 PRSS1P07477 247 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 APOC4P55056 127 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 DEFA6Q01524 100 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 C3orf56Q8N813 242 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 OVOL2Q9BRP0 275 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 MRPL16Q9NX20 251 aaKnown RBP11.1□□□□□ -0.63
SGCE-205ENST00000437425 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
SGCE-205ENST00000437425 TRGV1A0A0A0MS02 117 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 C2orf66Q6UXQ4 117 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 Q6ZN92 141 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 SCGB3A1Q96QR1 104 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 UQCR10Q9UDW1 63 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 TNFRSF18Q9Y5U5 241 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 TRAV12-1A0A0B4J245 112 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 PRM2P04554 102 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 ERASQ7Z444 233 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 ATOH7Q8N100 152 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 C18orf15Q96N68 181 aa11.09□□□□□ -0.63
SGCE-205ENST00000437425 MRPL52Q86TS9 123 aaKnown RBP11.08□□□□□ -0.64
SGCE-205ENST00000437425 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
SGCE-205ENST00000437425 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
SGCE-205ENST00000437425 C12orf54Q6X4T0 127 aa11.07□□□□□ -0.64
SGCE-205ENST00000437425 MDFIQ99750 246 aa11.07□□□□□ -0.64
SGCE-205ENST00000437425 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
SGCE-205ENST00000437425 IGLL1P15814 213 aa11.06□□□□□ -0.64
SGCE-205ENST00000437425 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
SGCE-205ENST00000437425 ZMAT4Q9H898 229 aa11.06□□□□□ -0.64
SGCE-205ENST00000437425 ODF1Q14990 250 aa11.05□□□□□ -0.64
SGCE-205ENST00000437425 NOP10Q9NPE3 64 aaKnown RBP11.05□□□□□ -0.64
SGCE-205ENST00000437425 A0A087WX48 190 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 PLAC8L1A1L4L8 177 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 DPM2O94777 84 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 PLNP26678 52 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 SPATA3Q8NHX4 192 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 JMJD1CQ15652 2540 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 NPSP0C0P6 89 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 Q6ZTI0 123 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 PMCHL2Q9BQD1 86 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
SGCE-205ENST00000437425 TSHBP01222 138 aa11.03□□□□□ -0.64
SGCE-205ENST00000437425 IGKCP01834 107 aa11.03□□□□□ -0.64
SGCE-205ENST00000437425 LBHQ53QV2 105 aaPredicted RBP11.03□□□□□ -0.64
SGCE-205ENST00000437425 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
SGCE-205ENST00000437425 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
SGCE-205ENST00000437425 PRIMA1Q86XR5 153 aa11.03□□□□□ -0.64
SGCE-205ENST00000437425 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
SGCE-205ENST00000437425 TRGV2A0A075B6R0 118 aa11.02□□□□□ -0.65
SGCE-205ENST00000437425 hDV102S1A0JD36 115 aa11.02□□□□□ -0.65
SGCE-205ENST00000437425 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
SGCE-205ENST00000437425 MAJINQ3KP22 176 aa11.02□□□□□ -0.65
SGCE-205ENST00000437425 C20orf203Q8NBC4 194 aa11.02□□□□□ -0.65
SGCE-205ENST00000437425 F8VRH5 84 aa11.01□□□□□ -0.65
SGCE-205ENST00000437425 K7EQD1 137 aa11.01□□□□□ -0.65
SGCE-205ENST00000437425 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
SGCE-205ENST00000437425 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
SGCE-205ENST00000437425 C14orf144Q96I85 54 aa11.01□□□□□ -0.65
SGCE-205ENST00000437425 DKK2Q9UBU2 259 aa11.01□□□□□ -0.65
SGCE-205ENST00000437425 ATRQ13535 2644 aa11.01□□□□□ -0.65
SGCE-205ENST00000437425 TRBV7-3A0A075B6L6 115 aa11□□□□□ -0.65
SGCE-205ENST00000437425 TRBV6-4A0A1B0GX49 114 aa11□□□□□ -0.65
SGCE-205ENST00000437425 CRYBA4P53673 196 aa11□□□□□ -0.65
SGCE-205ENST00000437425 SLC25A34Q6PIV7 304 aa11□□□□□ -0.65
SGCE-205ENST00000437425 Q6ZSN1 163 aa11□□□□□ -0.65
SGCE-205ENST00000437425 BAALCQ8WXS3 180 aa11□□□□□ -0.65
SGCE-205ENST00000437425 ZNF479Q96JC4 524 aa11□□□□□ -0.65
SGCE-205ENST00000437425 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
SGCE-205ENST00000437425 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
SGCE-205ENST00000437425 COTL1Q14019 142 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 PMVKQ15126 192 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 DAZ4Q86SG3 579 aaKnown RBP10.99□□□□□ -0.65
SGCE-205ENST00000437425 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 DAZ3Q9NR90 486 aaKnown RBP10.99□□□□□ -0.65
SGCE-205ENST00000437425 MRPS16Q9Y3D3 137 aaKnown RBP10.99□□□□□ -0.65
SGCE-205ENST00000437425 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
SGCE-205ENST00000437425 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 LYRM9A8MSI8 78 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 GAGE7O76087 117 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 SMAGPQ0VAQ4 97 aa10.99□□□□□ -0.65
SGCE-205ENST00000437425 MRPL35Q9NZE8 188 aaKnown RBP10.99□□□□□ -0.65
SGCE-205ENST00000437425 X6R8D5 127 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms