RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 C3orf84H3BNL1 204 aa11.67□□□□□ -0.54
CALD1-209ENST00000436461 APLNQ9ULZ1 77 aa11.67□□□□□ -0.54
CALD1-209ENST00000436461 TRBV24-1A0A075B6N3 115 aa11.66□□□□□ -0.54
CALD1-209ENST00000436461 RPS10P46783 165 aaKnown RBP11.66□□□□□ -0.54
CALD1-209ENST00000436461 ZNRF2Q8NHG8 242 aa11.66□□□□□ -0.54
CALD1-209ENST00000436461 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
CALD1-209ENST00000436461 ICOSQ9Y6W8 199 aa11.66□□□□□ -0.54
CALD1-209ENST00000436461 RASL11AQ6T310 242 aa11.65□□□□□ -0.54
CALD1-209ENST00000436461 H3BNG1 76 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 C15orf53Q8NAA6 179 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 VPS13DQ5THJ4 4388 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 TRBV10-1A0A0K0K1A3 114 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 D6R8Y8 96 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 H7C1H1 209 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 SRIP30626 198 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 MRPL23Q16540 153 aaKnown RBP11.64□□□□□ -0.55
CALD1-209ENST00000436461 KIAA1644Q3SXP7 199 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 DEFB104AQ8WTQ1 72 aa11.64□□□□□ -0.55
CALD1-209ENST00000436461 DNAH1Q9P2D7 4330 aa11.63□□□□□ -0.55
CALD1-209ENST00000436461 TRBV7-3A0A075B6L6 115 aa11.63□□□□□ -0.55
CALD1-209ENST00000436461 IGHV3-38A0A0C4DH36 116 aa11.63□□□□□ -0.55
CALD1-209ENST00000436461 LINC00694P0DN24 101 aa11.63□□□□□ -0.55
CALD1-209ENST00000436461 CKS2P33552 79 aa11.63□□□□□ -0.55
CALD1-209ENST00000436461 RPL36AP83881 106 aaKnown RBP11.63□□□□□ -0.55
CALD1-209ENST00000436461 RPL36ALQ969Q0 106 aaKnown RBP11.63□□□□□ -0.55
CALD1-209ENST00000436461 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
CALD1-209ENST00000436461 GNB1LQ9BYB4 327 aa11.63□□□□□ -0.55
CALD1-209ENST00000436461 FRZBQ92765 325 aa11.62□□□□□ -0.55
CALD1-209ENST00000436461 NIT2Q9NQR4 276 aa11.62□□□□□ -0.55
CALD1-209ENST00000436461 HLA-DQA1P01909 254 aa11.61□□□□□ -0.55
CALD1-209ENST00000436461 OR10J3Q5JRS4 329 aa11.61□□□□□ -0.55
CALD1-209ENST00000436461 NRACQ8N912 160 aa11.61□□□□□ -0.55
CALD1-209ENST00000436461 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
CALD1-209ENST00000436461 TNFRSF18Q9Y5U5 241 aa11.61□□□□□ -0.55
CALD1-209ENST00000436461 COLCA2A8K830 154 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 APCSP02743 223 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 UBE2D3P61077 147 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 UBE2D2P62837 147 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 NPYP01303 97 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 ESRGQ1W209 222 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 ATP6V0E2Q8NHE4 81 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 TRAPPC1Q9Y5R8 145 aa11.6□□□□□ -0.55
CALD1-209ENST00000436461 SACSQ9NZJ4 4579 aa11.59□□□□□ -0.55
CALD1-209ENST00000436461 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
CALD1-209ENST00000436461 COX19Q49B96 90 aa11.59□□□□□ -0.55
CALD1-209ENST00000436461 ORMDL3Q8N138 153 aa11.59□□□□□ -0.55
CALD1-209ENST00000436461 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
CALD1-209ENST00000436461 TNFRSF6BO95407 300 aa11.58□□□□□ -0.56
CALD1-209ENST00000436461 TCTAP57738 103 aa11.58□□□□□ -0.56
CALD1-209ENST00000436461 LYPD5Q6UWN5 251 aa11.58□□□□□ -0.56
CALD1-209ENST00000436461 DNAJC30Q96LL9 226 aa11.58□□□□□ -0.56
CALD1-209ENST00000436461 PRELID3AQ96N28 172 aa11.58□□□□□ -0.56
CALD1-209ENST00000436461 SDHAF1A6NFY7 115 aa11.57□□□□□ -0.56
CALD1-209ENST00000436461 MT-ND6P03923 174 aa11.57□□□□□ -0.56
CALD1-209ENST00000436461 ST20Q9HBF5 79 aa11.57□□□□□ -0.56
CALD1-209ENST00000436461 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
CALD1-209ENST00000436461 TRBV6-5A0A0K0K1A5 114 aa11.56□□□□□ -0.56
CALD1-209ENST00000436461 PPBPP02775 128 aa11.56□□□□□ -0.56
CALD1-209ENST00000436461 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
CALD1-209ENST00000436461 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
CALD1-209ENST00000436461 GTSF1LQ9H1H1 148 aa11.56□□□□□ -0.56
CALD1-209ENST00000436461 RAB5AP20339 215 aa11.55□□□□□ -0.56
CALD1-209ENST00000436461 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.55□□□□□ -0.56
CALD1-209ENST00000436461 HYDINQ4G0P3 5121 aa11.54□□□□□ -0.56
CALD1-209ENST00000436461 LOC389332A0A1B0GUA5 103 aa11.54□□□□□ -0.56
CALD1-209ENST00000436461 CCL18P55774 89 aa11.54□□□□□ -0.56
CALD1-209ENST00000436461 DAZ4Q86SG3 579 aaKnown RBP11.54□□□□□ -0.56
CALD1-209ENST00000436461 UBE2DNLQ8IWF7 75 aa11.54□□□□□ -0.56
CALD1-209ENST00000436461 DAZ3Q9NR90 486 aaKnown RBP11.54□□□□□ -0.56
CALD1-209ENST00000436461 KMT2AQ03164 3969 aa11.53□□□□□ -0.56
CALD1-209ENST00000436461 TRGC2P03986 189 aa11.53□□□□□ -0.56
CALD1-209ENST00000436461 POLR2KP53803 58 aaKnown RBP11.53□□□□□ -0.56
CALD1-209ENST00000436461 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
CALD1-209ENST00000436461 SH2D6Q7Z4S9 175 aa11.53□□□□□ -0.56
CALD1-209ENST00000436461 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
CALD1-209ENST00000436461 PPP1R17O96001 155 aa11.53□□□□□ -0.56
CALD1-209ENST00000436461 PMCHP20382 165 aa11.52□□□□□ -0.57
CALD1-209ENST00000436461 KMT2CQ8NEZ4 4911 aaKnown RBP11.51□□□□□ -0.57
CALD1-209ENST00000436461 LY6G6CO95867 125 aa11.51□□□□□ -0.57
CALD1-209ENST00000436461 WFDC10BQ8IUB3 73 aa11.51□□□□□ -0.57
CALD1-209ENST00000436461 C20orf78Q9BR46 151 aa11.51□□□□□ -0.57
CALD1-209ENST00000436461 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
CALD1-209ENST00000436461 TRBV27A0A0K0K1C4 114 aa11.5□□□□□ -0.57
CALD1-209ENST00000436461 I3L3M4 83 aa11.5□□□□□ -0.57
CALD1-209ENST00000436461 PHOX2AO14813 284 aa11.5□□□□□ -0.57
CALD1-209ENST00000436461 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
CALD1-209ENST00000436461 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
CALD1-209ENST00000436461 MAP1LC3AQ9H492 121 aa11.5□□□□□ -0.57
CALD1-209ENST00000436461 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
CALD1-209ENST00000436461 TRBV6-8A0A0A6YYG3 113 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 TSHBP01222 138 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 COTL1Q14019 142 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 LELP1Q5T871 98 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 MRPS16Q9Y3D3 137 aaKnown RBP11.49□□□□□ -0.57
CALD1-209ENST00000436461 VCYO14598 125 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 TCAPO15273 167 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 LGALS9CQ6DKI2 356 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 Q8N3U1 123 aa11.49□□□□□ -0.57
CALD1-209ENST00000436461 IGLV2-18A0A075B6J9 118 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms