RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NDUFS6O75380 124 aaKnown RBP8.64□□□□□ -1.03
SCN4A-201ENST00000435607 C3orf22Q8N5N4 141 aa8.64□□□□□ -1.03
SCN4A-201ENST00000435607 LOC105371267A0A1B0GV96 52 aa8.64□□□□□ -1.03
SCN4A-201ENST00000435607 Q8N9W7 124 aa8.64□□□□□ -1.03
SCN4A-201ENST00000435607 U3KQA8 63 aa8.64□□□□□ -1.03
SCN4A-201ENST00000435607 TRAV10A0A0B4J240 114 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
SCN4A-201ENST00000435607 NRGNQ92686 78 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 PROK2Q9HC23 129 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 UTRNP46939 3433 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 MUC4Q99102 2169 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 PRR14LQ5THK1 2151 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 PLXNA4Q9HCM2 1894 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 IGKV1D-37A0A075B6S9 117 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 ADORA2A-AS1P86434 159 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 IGFL2Q6UWQ7 119 aa8.63□□□□□ -1.03
SCN4A-201ENST00000435607 NUP210Q8TEM1 1887 aaPredicted RBP8.63□□□□□ -1.03
SCN4A-201ENST00000435607 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 A0A0J9YXV3 536 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 FSHBP01225 129 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 CTSGP08311 255 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 IGLL1P15814 213 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 WIPF3A6NGB9 483 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 LY6G6CO95867 125 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 REG3AQ06141 175 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 ADAMTS9Q9P2N4 1935 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 MIFP14174 115 aa8.62□□□□□ -1.03
SCN4A-201ENST00000435607 H7C423 109 aa8.61□□□□□ -1.03
SCN4A-201ENST00000435607 I3L2K1 104 aa8.61□□□□□ -1.03
SCN4A-201ENST00000435607 LGALS9O00182 355 aa8.61□□□□□ -1.03
SCN4A-201ENST00000435607 A0A096LNI7 61 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 SIP14410 1827 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 ZNF747Q9BV97 191 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 LINC00474Q9P2X8 69 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 K7EIM0 57 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 PCP2Q8IVA1 136 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 TRBV6-1A0A0K0K1D8 114 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 MAP6D1Q9H9H5 199 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 PTPN13Q12923 2485 aa8.6□□□□□ -1.03
SCN4A-201ENST00000435607 GATA1P15976 413 aaPredicted RBP8.6□□□□□ -1.03
SCN4A-201ENST00000435607 EP400Q96L91 3159 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 TCL1BO95988 128 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 BRK1Q8WUW1 75 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 P0DMU3 169 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 FAM231AP0DMU4 169 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 FAM231CP0DMU5 169 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
SCN4A-201ENST00000435607 UBE2D2P62837 147 aa8.59□□□□□ -1.03
SCN4A-201ENST00000435607 FAM222AQ5U5X8 452 aa8.59□□□□□ -1.04
SCN4A-201ENST00000435607 KIF26AQ9ULI4 1882 aaPredicted RBP8.58□□□□□ -1.04
SCN4A-201ENST00000435607 ZNF503-AS2A6NEH8 195 aa8.58□□□□□ -1.04
SCN4A-201ENST00000435607 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
SCN4A-201ENST00000435607 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
SCN4A-201ENST00000435607 GPR179Q6PRD1 2367 aa8.58□□□□□ -1.04
SCN4A-201ENST00000435607 LYPD6BQ8NI32 183 aa8.58□□□□□ -1.04
SCN4A-201ENST00000435607 SIPA1L1O43166 1804 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 PLXNB3Q9ULL4 1909 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 PLXNB1O43157 2135 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 TNFRSF13BO14836 293 aaPredicted RBP8.57□□□□□ -1.04
SCN4A-201ENST00000435607 ZFAND2AQ8N6M9 145 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 DAND5Q8N907 189 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 TANC1Q9C0D5 1861 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 WI2-2373I1.2A0A1W2PRP0 233 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 WT1P19544 449 aaPredicted RBP8.57□□□□□ -1.04
SCN4A-201ENST00000435607 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
SCN4A-201ENST00000435607 A0A0J9YX75 114 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 SPATA12Q7Z6I5 190 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 TANC2Q9HCD6 1990 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 FOXI1Q12951 378 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 C9orf85Q96MD7 179 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 A6NDX4 124 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 FAM19A5Q7Z5A7 132 aaPredicted RBP8.56□□□□□ -1.04
SCN4A-201ENST00000435607 CCDC168Q8NDH2 2452 aa8.56□□□□□ -1.04
SCN4A-201ENST00000435607 H3BT86 120 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 ZNF726P1Q15940 193 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 FBXL19-AS1Q494R0 122 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
SCN4A-201ENST00000435607 J3KT08 172 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 PRYO14603 147 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 PLXNA2O75051 1894 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 RPL39P62891 51 aaKnown RBP8.55□□□□□ -1.04
SCN4A-201ENST00000435607 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 OBSL1O75147 1896 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 CRYGBP07316 175 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 THSD7BQ9C0I4 1608 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 WFDC11Q8NEX6 87 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 ODF3Q96PU9 254 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 V9GYY9 64 aa8.55□□□□□ -1.04
SCN4A-201ENST00000435607 MIAQ16674 131 aa8.54□□□□□ -1.04
SCN4A-201ENST00000435607 PRORYQ9H606 182 aa8.54□□□□□ -1.04
SCN4A-201ENST00000435607 ACACBO00763 2458 aa8.54□□□□□ -1.04
SCN4A-201ENST00000435607 E9PLD3 99 aa8.54□□□□□ -1.04
SCN4A-201ENST00000435607 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms