RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 A6NHS1 94 aa9.52□□□□□ -0.89
NUP50-209ENST00000432340 KRBOX1C9JBD0 128 aa9.52□□□□□ -0.89
NUP50-209ENST00000432340 F5H697 171 aa9.52□□□□□ -0.89
NUP50-209ENST00000432340 H0Y9J4 135 aa9.52□□□□□ -0.89
NUP50-209ENST00000432340 SCGB1C1Q8TD33 95 aa9.52□□□□□ -0.89
NUP50-209ENST00000432340 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
NUP50-209ENST00000432340 TMEM243Q9BU79 118 aa9.52□□□□□ -0.89
NUP50-209ENST00000432340 M0R036 132 aa9.51□□□□□ -0.89
NUP50-209ENST00000432340 UBE2L6O14933 153 aa9.51□□□□□ -0.89
NUP50-209ENST00000432340 TMBIM6P55061 237 aa9.51□□□□□ -0.89
NUP50-209ENST00000432340 EIF5AP63241 154 aaKnown RBP9.51□□□□□ -0.89
NUP50-209ENST00000432340 TSKUQ8WUA8 353 aa9.51□□□□□ -0.89
NUP50-209ENST00000432340 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
NUP50-209ENST00000432340 RBM38Q9H0Z9 239 aaKnown RBP9.51□□□□□ -0.89
NUP50-209ENST00000432340 EPDR1Q9UM22 224 aa9.51□□□□□ -0.89
NUP50-209ENST00000432340 IGLV7-43P04211 117 aa9.5□□□□□ -0.89
NUP50-209ENST00000432340 S100A5P33763 92 aa9.5□□□□□ -0.89
NUP50-209ENST00000432340 TRIQKQ629K1 86 aa9.5□□□□□ -0.89
NUP50-209ENST00000432340 GRIFINA4D1Z8 144 aa9.49□□□□□ -0.89
NUP50-209ENST00000432340 PTTG1IPP53801 180 aa9.49□□□□□ -0.89
NUP50-209ENST00000432340 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
NUP50-209ENST00000432340 ARL2-SNX15V9GYD0 113 aa9.49□□□□□ -0.89
NUP50-209ENST00000432340 V9GYH0 126 aa9.49□□□□□ -0.89
NUP50-209ENST00000432340 IGLV4-60A0A075B6I1 120 aa9.48□□□□□ -0.89
NUP50-209ENST00000432340 NOL3O60936 208 aaKnown RBP9.48□□□□□ -0.89
NUP50-209ENST00000432340 SMIM17P0DL12 118 aa9.48□□□□□ -0.89
NUP50-209ENST00000432340 AMTP48728 403 aa9.48□□□□□ -0.89
NUP50-209ENST00000432340 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
NUP50-209ENST00000432340 FAM162BQ5T6X4 162 aa9.48□□□□□ -0.89
NUP50-209ENST00000432340 ZNF471Q9BX82 626 aaPredicted RBP9.48□□□□□ -0.89
NUP50-209ENST00000432340 MED28Q9H204 178 aa9.48□□□□□ -0.89
NUP50-209ENST00000432340 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
NUP50-209ENST00000432340 IL15RAQ13261 267 aa9.47□□□□□ -0.89
NUP50-209ENST00000432340 ISOC2Q96AB3 205 aa9.47□□□□□ -0.89
NUP50-209ENST00000432340 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.9
NUP50-209ENST00000432340 LOC107984640A0A0U1RRK4 108 aa9.46□□□□□ -0.9
NUP50-209ENST00000432340 EIF3GO75821 320 aaKnown RBP eCLIP9.46□□□□□ -0.9
NUP50-209ENST00000432340 GAGE2BQ13066 116 aa9.46□□□□□ -0.9
NUP50-209ENST00000432340 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
NUP50-209ENST00000432340 ZNF561-AS1K7EIQ3 104 aa9.45□□□□□ -0.9
NUP50-209ENST00000432340 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
NUP50-209ENST00000432340 FGF6P10767 208 aa9.45□□□□□ -0.9
NUP50-209ENST00000432340 CYCSP99999 105 aaKnown RBP9.45□□□□□ -0.9
NUP50-209ENST00000432340 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
NUP50-209ENST00000432340 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
NUP50-209ENST00000432340 TMEM167BQ9NRX6 74 aa9.45□□□□□ -0.9
NUP50-209ENST00000432340 IGHV1-58A0A0C4DH39 117 aa9.44□□□□□ -0.9
NUP50-209ENST00000432340 IGKV3OR2-268A0A0C4DH90 116 aa9.44□□□□□ -0.9
NUP50-209ENST00000432340 SH2D1AO60880 128 aa9.44□□□□□ -0.9
NUP50-209ENST00000432340 ZFP30Q9Y2G7 519 aa9.44□□□□□ -0.9
NUP50-209ENST00000432340 TSPAN13O95857 204 aa9.43□□□□□ -0.9
NUP50-209ENST00000432340 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
NUP50-209ENST00000432340 A0A087WZ39 114 aa9.42□□□□□ -0.9
NUP50-209ENST00000432340 TMSB15BA0A087X1C1 80 aa9.42□□□□□ -0.9
NUP50-209ENST00000432340 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
NUP50-209ENST00000432340 KRTAP1-4P0C5Y4 121 aa9.42□□□□□ -0.9
NUP50-209ENST00000432340 CDC34P49427 236 aaPredicted RBP9.42□□□□□ -0.9
NUP50-209ENST00000432340 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
NUP50-209ENST00000432340 SPANXN1Q5VSR9 72 aa9.42□□□□□ -0.9
NUP50-209ENST00000432340 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
NUP50-209ENST00000432340 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
NUP50-209ENST00000432340 STAG3L3P0CL85 134 aa9.41□□□□□ -0.9
NUP50-209ENST00000432340 GCHFRP30047 84 aa9.41□□□□□ -0.9
NUP50-209ENST00000432340 COX8CQ7Z4L0 72 aa9.41□□□□□ -0.9
NUP50-209ENST00000432340 Q86TA4 180 aa9.41□□□□□ -0.9
NUP50-209ENST00000432340 PGLYRP4Q96LB8 373 aa9.41□□□□□ -0.9
NUP50-209ENST00000432340 RPL12P30050 165 aaKnown RBP9.4□□□□□ -0.9
NUP50-209ENST00000432340 AP1S3Q96PC3 154 aa9.4□□□□□ -0.9
NUP50-209ENST00000432340 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
NUP50-209ENST00000432340 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
NUP50-209ENST00000432340 BTCP35070 178 aa9.39□□□□□ -0.91
NUP50-209ENST00000432340 CRIP1P50238 77 aa9.39□□□□□ -0.91
NUP50-209ENST00000432340 TPRXLQ17RH7 258 aa9.39□□□□□ -0.91
NUP50-209ENST00000432340 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
NUP50-209ENST00000432340 OR10AG1Q8NH19 301 aa9.39□□□□□ -0.91
NUP50-209ENST00000432340 HIST1H2BAQ96A08 127 aa9.39□□□□□ -0.91
NUP50-209ENST00000432340 CXorf1O96002 111 aa9.38□□□□□ -0.91
NUP50-209ENST00000432340 CXCL1P09341 107 aa9.38□□□□□ -0.91
NUP50-209ENST00000432340 FOXI1Q12951 378 aa9.38□□□□□ -0.91
NUP50-209ENST00000432340 COTL1Q14019 142 aa9.38□□□□□ -0.91
NUP50-209ENST00000432340 SEC22CQ9BRL7 303 aa9.38□□□□□ -0.91
NUP50-209ENST00000432340 NKX6-2Q9C056 277 aaPredicted RBP9.38□□□□□ -0.91
NUP50-209ENST00000432340 APOMO95445 188 aa9.37□□□□□ -0.91
NUP50-209ENST00000432340 CRYGAP11844 174 aa9.37□□□□□ -0.91
NUP50-209ENST00000432340 CAMPP49913 170 aa9.37□□□□□ -0.91
NUP50-209ENST00000432340 EIF5AL1Q6IS14 154 aaKnown RBP9.37□□□□□ -0.91
NUP50-209ENST00000432340 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
NUP50-209ENST00000432340 M0QY20 66 aa9.36□□□□□ -0.91
NUP50-209ENST00000432340 PEX7O00628 323 aa9.36□□□□□ -0.91
NUP50-209ENST00000432340 UBE2G1P62253 170 aa9.36□□□□□ -0.91
NUP50-209ENST00000432340 LRRC37A5PQ49AS3 106 aa9.36□□□□□ -0.91
NUP50-209ENST00000432340 RAB24Q969Q5 203 aa9.36□□□□□ -0.91
NUP50-209ENST00000432340 HSPB11Q9Y547 144 aa9.36□□□□□ -0.91
NUP50-209ENST00000432340 MBP02144 154 aa9.35□□□□□ -0.91
NUP50-209ENST00000432340 OR5AL1P0C617 328 aa9.35□□□□□ -0.91
NUP50-209ENST00000432340 XCL1P47992 114 aa9.35□□□□□ -0.91
NUP50-209ENST00000432340 LINC00526Q96FQ7 95 aa9.35□□□□□ -0.91
NUP50-209ENST00000432340 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
NUP50-209ENST00000432340 IGLV4-69A0A075B6H9 119 aa9.34□□□□□ -0.91
NUP50-209ENST00000432340 PET100P0DJ07 73 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms