RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 COL12A1Q99715 3063 aa5.19□□□□□ -1.58
LINC00390-201ENST00000432331 USF3Q68DE3 2245 aa5.19□□□□□ -1.58
LINC00390-201ENST00000432331 IGLV4-69A0A075B6H9 119 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 LYNX1G3V0Z9 82 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 TIMM17BO60830 172 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 IGHG2P01859 326 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 LYNX1P0DP58 116 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 MED14OSP0DP75 135 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 ZNF22P17026 224 aaPredicted RBP5.18□□□□□ -1.58
LINC00390-201ENST00000432331 DSCR9P59020 149 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 KRTAP10-9P60411 292 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 DEFB113Q30KQ7 82 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 LINC00336Q6ZUF6 198 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 CD177Q8N6Q3 437 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 DEFB108BQ8NET1 73 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 C8orf49Q96NF6 230 aa5.18□□□□□ -1.58
LINC00390-201ENST00000432331 RAI1Q7Z5J4 1906 aaPredicted RBP5.18□□□□□ -1.58
LINC00390-201ENST00000432331 KNCNA6PVL3 124 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 NBR2O15453 112 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 NDUFB3O43676 98 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 NDUFC1O43677 76 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 IGHV1-69P01742 117 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 SMCR5Q8TEV8 140 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 GAFA1Q96PS6 74 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 CCL13Q99616 98 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 BPESC1Q9GZL8 116 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 KAAG1Q9UBP8 84 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 RPUSD1Q9UJJ7 312 aaKnown RBP5.17□□□□□ -1.58
LINC00390-201ENST00000432331 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
LINC00390-201ENST00000432331 SPTAN1Q13813 2472 aaKnown RBP5.17□□□□□ -1.58
LINC00390-201ENST00000432331 SPTBN1Q01082 2364 aaKnown RBP5.16□□□□□ -1.58
LINC00390-201ENST00000432331 USP17L23D6RBM5 183 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 COX7A2LO14548 114 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 TFF1P04155 84 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 C17orf58Q2M2W7 97 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 ZNF876PQ49A33 203 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 Q6ZS46 218 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 MUSTN1Q8IVN3 82 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 RNF152Q8N8N0 203 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 ZNRF1Q8ND25 227 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 C10orf105Q8TEF2 133 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 MRPL53Q96EL3 112 aaKnown RBP5.16□□□□□ -1.58
LINC00390-201ENST00000432331 TMEM243Q9BU79 118 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 CTSZQ9UBR2 303 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 USP9YO00507 2555 aaPredicted RBP5.16□□□□□ -1.58
LINC00390-201ENST00000432331 HELZ2Q9BYK8 2649 aaKnown RBP5.16□□□□□ -1.58
LINC00390-201ENST00000432331 CADP27708 2225 aa5.16□□□□□ -1.58
LINC00390-201ENST00000432331 HEATR1Q9H583 2144 aaKnown RBP5.15□□□□□ -1.58
LINC00390-201ENST00000432331 PRR14LQ5THK1 2151 aa5.15□□□□□ -1.58
LINC00390-201ENST00000432331 TRAV41A0A0B4J266 112 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 CGB1A6NKQ9 187 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 EIF4EBP3O60516 100 aaPredicted RBP5.15□□□□□ -1.59
LINC00390-201ENST00000432331 IGKV1-16P04430 117 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 RPL27AP46776 148 aaKnown RBP5.15□□□□□ -1.59
LINC00390-201ENST00000432331 MIAQ16674 131 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 LYPD2Q6UXB3 125 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 LINC00311Q8N616 119 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 KLHL30-AS1Q8NEE0 82 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 DCTN5Q9BTE1 182 aa5.15□□□□□ -1.59
LINC00390-201ENST00000432331 MRPL36Q9P0J6 103 aaKnown RBP5.15□□□□□ -1.59
LINC00390-201ENST00000432331 PLCE1Q9P212 2302 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 IGHV4-30-2A0A087WSY4 118 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 TRBV10-3A0A0K0K1G6 114 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 H3BTX0 84 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 H7C2G1 150 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 ENSAO43768 121 aaKnown RBP5.14□□□□□ -1.59
LINC00390-201ENST00000432331 DNAL4O96015 105 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 UBE2E1P51965 193 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 C1orf229Q6ZS94 237 aaPredicted RBP5.14□□□□□ -1.59
LINC00390-201ENST00000432331 TMEM61Q8N0U2 210 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 ZNF491Q8N8L2 437 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 PKIGQ9Y2B9 76 aa5.14□□□□□ -1.59
LINC00390-201ENST00000432331 GCN1Q92616 2671 aaKnown RBP5.14□□□□□ -1.59
LINC00390-201ENST00000432331 IGHV4-61A0A0C4DH41 118 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RBMY1BA6NDE4 496 aaKnown RBP5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RBMY1EA6NEQ0 496 aaKnown RBP5.13□□□□□ -1.59
LINC00390-201ENST00000432331 IGIPA6NJ69 53 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 I3L3M4 83 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RBMY1DP0C7P1 496 aaKnown RBP5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RBMY1A1P0DJD3 496 aaKnown RBP5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RBMY1CP0DJD4 496 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 GATA1P15976 413 aaPredicted RBP5.13□□□□□ -1.59
LINC00390-201ENST00000432331 TSPEAR-AS2P59090 65 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 CFHR3Q02985 330 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RBMY1FQ15415 496 aaKnown RBP5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RHOHQ15669 191 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 OXLD1Q5BKU9 147 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 SPANXN1Q5VSR9 72 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 DYNAPQ8N1N2 210 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 C16orf92Q96LL3 132 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 MSRB1Q9NZV6 116 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 LENEPQ9Y5L5 61 aa5.13□□□□□ -1.59
LINC00390-201ENST00000432331 RTTNQ86VV8 2226 aa5.12□□□□□ -1.59
LINC00390-201ENST00000432331 PKDREJQ9NTG1 2253 aa5.12□□□□□ -1.59
LINC00390-201ENST00000432331 HRNRQ86YZ3 2850 aaPredicted RBP5.12□□□□□ -1.59
LINC00390-201ENST00000432331 IGHV4OR15-8A0A075B7B6 117 aa5.12□□□□□ -1.59
LINC00390-201ENST00000432331 A0A087WW49 117 aa5.12□□□□□ -1.59
LINC00390-201ENST00000432331 TRAV8-3A0A0A6YYJ7 113 aa5.12□□□□□ -1.59
LINC00390-201ENST00000432331 IGHV7-4-1A0A0J9YVY3 117 aa5.12□□□□□ -1.59
LINC00390-201ENST00000432331 GAS8-AS1O95177 125 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms