RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PTH2Q96A98 100 aa14.19□□□□□ -0.14
VRK2-205ENST00000432057 SPXQ9BT56 116 aa14.19□□□□□ -0.14
VRK2-205ENST00000432057 A8MWV9 139 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 TCTAP57738 103 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 UFSP1Q6NVU6 142 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 SLC25A34Q6PIV7 304 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 ZFP2Q6ZN57 461 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 ZMAT4Q9H898 229 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 F8P00451 2351 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 TRBV27A0A0K0K1C4 114 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 GIG44P09565 113 aaPredicted RBP14.18□□□□□ -0.14
VRK2-205ENST00000432057 PIK3CD-AS1Q5SR53 167 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 SPATA3Q8NHX4 192 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 KIR2DL4Q99706 377 aa14.18□□□□□ -0.14
VRK2-205ENST00000432057 VWFP04275 2813 aa14.17□□□□□ -0.14
VRK2-205ENST00000432057 BATFQ16520 125 aa14.17□□□□□ -0.14
VRK2-205ENST00000432057 CFAP126Q5VTH2 177 aa14.17□□□□□ -0.14
VRK2-205ENST00000432057 IL17DQ8TAD2 202 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 A0A1B0GV90 55 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 IGKCP01834 107 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 P0DMU3 169 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 FAM231AP0DMU4 169 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 FAM231CP0DMU5 169 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 EDA2RQ9HAV5 297 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 MRPL35Q9NZE8 188 aaKnown RBP14.16□□□□□ -0.14
VRK2-205ENST00000432057 TP53TG1Q9Y2A0 90 aa14.16□□□□□ -0.14
VRK2-205ENST00000432057 MRPS16Q9Y3D3 137 aaKnown RBP14.16□□□□□ -0.14
VRK2-205ENST00000432057 A0A087WX48 190 aa14.15□□□□□ -0.14
VRK2-205ENST00000432057 CYSRT1A8MQ03 144 aa14.15□□□□□ -0.14
VRK2-205ENST00000432057 H7C1H1 209 aa14.15□□□□□ -0.14
VRK2-205ENST00000432057 DPM2O94777 84 aa14.15□□□□□ -0.14
VRK2-205ENST00000432057 COX8AP10176 69 aa14.15□□□□□ -0.14
VRK2-205ENST00000432057 CYSLTR1Q9Y271 337 aa14.15□□□□□ -0.14
VRK2-205ENST00000432057 RNASE8Q8TDE3 154 aaKnown RBP14.14□□□□□ -0.15
VRK2-205ENST00000432057 RIPPLY3P57055 190 aa14.14□□□□□ -0.15
VRK2-205ENST00000432057 RPL39P62891 51 aaKnown RBP14.14□□□□□ -0.15
VRK2-205ENST00000432057 Q6ZSN1 163 aa14.14□□□□□ -0.15
VRK2-205ENST00000432057 TRAV12-1A0A0B4J245 112 aa14.13□□□□□ -0.15
VRK2-205ENST00000432057 RS1O15537 224 aa14.13□□□□□ -0.15
VRK2-205ENST00000432057 TSHBP01222 138 aa14.13□□□□□ -0.15
VRK2-205ENST00000432057 ERASQ7Z444 233 aa14.13□□□□□ -0.15
VRK2-205ENST00000432057 BAALCQ8WXS3 180 aa14.13□□□□□ -0.15
VRK2-205ENST00000432057 NEXN-AS1Q8NBZ9 246 aa14.12□□□□□ -0.15
VRK2-205ENST00000432057 TMEM263Q8WUH6 116 aaKnown RBP14.12□□□□□ -0.15
VRK2-205ENST00000432057 HHLA3Q9XRX5 114 aa14.12□□□□□ -0.15
VRK2-205ENST00000432057 TEP1Q99973 2627 aaKnown RBP14.12□□□□□ -0.15
VRK2-205ENST00000432057 RHODO00212 210 aa14.12□□□□□ -0.15
VRK2-205ENST00000432057 FGF6P10767 208 aa14.12□□□□□ -0.15
VRK2-205ENST00000432057 CITED1Q99966 193 aa14.12□□□□□ -0.15
VRK2-205ENST00000432057 TRGV1A0A0A0MS02 117 aa14.11□□□□□ -0.15
VRK2-205ENST00000432057 G0S2P27469 103 aa14.11□□□□□ -0.15
VRK2-205ENST00000432057 I3L3M4 83 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 HINT1P49773 126 aaPredicted RBP14.1□□□□□ -0.15
VRK2-205ENST00000432057 RHOHQ15669 191 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 Q9UF83 564 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 CHTOPQ9Y3Y2 248 aaKnown RBP14.1□□□□□ -0.15
VRK2-205ENST00000432057 ATRQ13535 2644 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 F8VRH5 84 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 NMUP48645 174 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 CSNK1G2-AS1Q8NCQ2 148 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 C1QTNF4Q9BXJ3 329 aa14.1□□□□□ -0.15
VRK2-205ENST00000432057 NOTCH3Q9UM47 2321 aa14.09□□□□□ -0.15
VRK2-205ENST00000432057 IGIPA6NJ69 53 aa14.09□□□□□ -0.15
VRK2-205ENST00000432057 C9orf66Q5T8R8 295 aa14.09□□□□□ -0.15
VRK2-205ENST00000432057 ZC2HC1BQ5TFG8 222 aa14.09□□□□□ -0.15
VRK2-205ENST00000432057 GTSCR1Q86UQ5 136 aa14.09□□□□□ -0.15
VRK2-205ENST00000432057 IGHV3-53P01767 116 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 PLNP26678 52 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 Q6ZTI0 123 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 C2orf91Q6ZV80 131 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 TNFRSF18Q9Y5U5 241 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 IGKV2D-26A0A0A0MRZ7 120 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 LINC01549A6NIU2 74 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 INSL3P51460 131 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 PCP2Q8IVA1 136 aa14.08□□□□□ -0.16
VRK2-205ENST00000432057 PRSS29PA6NIE9 313 aa14.07□□□□□ -0.16
VRK2-205ENST00000432057 BOD1L2Q8IYS8 172 aa14.07□□□□□ -0.16
VRK2-205ENST00000432057 OR4C5Q8NGB2 326 aa14.06□□□□□ -0.16
VRK2-205ENST00000432057 C16orf74Q96GX8 76 aa14.06□□□□□ -0.16
VRK2-205ENST00000432057 TIMM17AQ99595 171 aa14.06□□□□□ -0.16
VRK2-205ENST00000432057 PLAC8L1A1L4L8 177 aa14.06□□□□□ -0.16
VRK2-205ENST00000432057 TMEM141Q96I45 108 aa14.06□□□□□ -0.16
VRK2-205ENST00000432057 NOP10Q9NPE3 64 aaKnown RBP14.06□□□□□ -0.16
VRK2-205ENST00000432057 MPV17L2Q567V2 206 aa14.05□□□□□ -0.16
VRK2-205ENST00000432057 C20orf203Q8NBC4 194 aa14.05□□□□□ -0.16
VRK2-205ENST00000432057 ZNF479Q96JC4 524 aa14.05□□□□□ -0.16
VRK2-205ENST00000432057 COL5A1-AS1Q5SY13 56 aa14.04□□□□□ -0.16
VRK2-205ENST00000432057 TTTY13Q9BZ97 58 aa14.04□□□□□ -0.16
VRK2-205ENST00000432057 DAZ2Q13117 558 aaKnown RBP14.03□□□□□ -0.16
VRK2-205ENST00000432057 RRN3P1Q2M238 152 aa14.03□□□□□ -0.16
VRK2-205ENST00000432057 DLEU1O43261 78 aa14.02□□□□□ -0.16
VRK2-205ENST00000432057 PMVKQ15126 192 aa14.02□□□□□ -0.16
VRK2-205ENST00000432057 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.16
VRK2-205ENST00000432057 TRAV4A0A0B4J268 109 aa14.01□□□□□ -0.17
VRK2-205ENST00000432057 OPRPNQ99935 248 aaPredicted RBP14.01□□□□□ -0.17
VRK2-205ENST00000432057 IGHV3-38A0A0C4DH36 116 aa14.01□□□□□ -0.17
VRK2-205ENST00000432057 PHLDA1Q8WV24 401 aaPredicted RBP14.01□□□□□ -0.17
VRK2-205ENST00000432057 CST9LQ9H4G1 147 aa14.01□□□□□ -0.17
VRK2-205ENST00000432057 IGLV4-69A0A075B6H9 119 aa14□□□□□ -0.17
VRK2-205ENST00000432057 EMP1P54849 157 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms