RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
USHBP1-203ENST00000431146 FCER1GP30273 86 aa12.17□□□□□ -0.46
USHBP1-203ENST00000431146 NEGR1Q7Z3B1 354 aa12.17□□□□□ -0.46
USHBP1-203ENST00000431146 POM121L12Q8N7R1 296 aa12.17□□□□□ -0.46
USHBP1-203ENST00000431146 TRRAPQ9Y4A5 3859 aa12.16□□□□□ -0.46
USHBP1-203ENST00000431146 CRYGDP07320 174 aa12.16□□□□□ -0.46
USHBP1-203ENST00000431146 MTURNQ8N3F0 131 aa12.16□□□□□ -0.46
USHBP1-203ENST00000431146 LAGE3Q14657 143 aa12.16□□□□□ -0.46
USHBP1-203ENST00000431146 ZNF56Q15929 161 aa12.16□□□□□ -0.46
USHBP1-203ENST00000431146 DEFB125Q8N687 156 aa12.16□□□□□ -0.46
USHBP1-203ENST00000431146 TRAV26-1A0A087WT03 109 aa12.15□□□□□ -0.46
USHBP1-203ENST00000431146 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
USHBP1-203ENST00000431146 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.46
USHBP1-203ENST00000431146 Q6ZVH6 145 aa12.15□□□□□ -0.46
USHBP1-203ENST00000431146 IFI27L1Q96BM0 104 aa12.15□□□□□ -0.46
USHBP1-203ENST00000431146 C19orf73Q9NVV2 129 aa12.15□□□□□ -0.46
USHBP1-203ENST00000431146 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
USHBP1-203ENST00000431146 AZU1P20160 251 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 LINC01545Q5VT33 79 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 C1orf158Q8N1D5 194 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 IGLL1P15814 213 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 HINT1P49773 126 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-203ENST00000431146 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
USHBP1-203ENST00000431146 BAHCC1Q9P281 2608 aa12.13□□□□□ -0.47
USHBP1-203ENST00000431146 ZNF415Q09FC8 603 aa12.13□□□□□ -0.47
USHBP1-203ENST00000431146 C11orf72Q8NBR9 251 aa12.13□□□□□ -0.47
USHBP1-203ENST00000431146 NUDT3O95989 172 aa12.12□□□□□ -0.47
USHBP1-203ENST00000431146 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
USHBP1-203ENST00000431146 M0R2P5 195 aa12.11□□□□□ -0.47
USHBP1-203ENST00000431146 GIG44P09565 113 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-203ENST00000431146 MORN3Q6PF18 240 aaPredicted RBP12.11□□□□□ -0.47
USHBP1-203ENST00000431146 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
USHBP1-203ENST00000431146 M0QY20 66 aa12.1□□□□□ -0.47
USHBP1-203ENST00000431146 TAX1BP3O14907 124 aa12.1□□□□□ -0.47
USHBP1-203ENST00000431146 TP73-AS1Q9UF72 201 aa12.1□□□□□ -0.47
USHBP1-203ENST00000431146 PPP1R17O96001 155 aa12.1□□□□□ -0.47
USHBP1-203ENST00000431146 CMC4P56277 68 aaPredicted RBP12.1□□□□□ -0.47
USHBP1-203ENST00000431146 CKS1BP61024 79 aa12.1□□□□□ -0.47
USHBP1-203ENST00000431146 CITED1Q99966 193 aa12.09□□□□□ -0.47
USHBP1-203ENST00000431146 FAM110AQ9BQ89 295 aa12.09□□□□□ -0.47
USHBP1-203ENST00000431146 LINC00467Q9BRT7 94 aa12.09□□□□□ -0.47
USHBP1-203ENST00000431146 DKK2Q9UBU2 259 aa12.09□□□□□ -0.47
USHBP1-203ENST00000431146 SDHAF1A6NFY7 115 aa12.08□□□□□ -0.47
USHBP1-203ENST00000431146 PRSS1P07477 247 aa12.08□□□□□ -0.47
USHBP1-203ENST00000431146 SIGMAR1Q99720 223 aa12.08□□□□□ -0.47
USHBP1-203ENST00000431146 TSPAN13O95857 204 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 P0DMU3 169 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 FAM231AP0DMU4 169 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 FAM231CP0DMU5 169 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 POLR2KP53803 58 aaKnown RBP12.08□□□□□ -0.48
USHBP1-203ENST00000431146 TCTAP57738 103 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 LGALS9BQ3B8N2 356 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 LGALS9CQ6DKI2 356 aa12.08□□□□□ -0.48
USHBP1-203ENST00000431146 CYSRT1A8MQ03 144 aa12.07□□□□□ -0.48
USHBP1-203ENST00000431146 SPXQ9BT56 116 aa12.07□□□□□ -0.48
USHBP1-203ENST00000431146 CFAP126Q5VTH2 177 aa12.06□□□□□ -0.48
USHBP1-203ENST00000431146 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
USHBP1-203ENST00000431146 OR11H2Q8NH07 326 aa12.06□□□□□ -0.48
USHBP1-203ENST00000431146 Q6ZSN1 163 aa12.05□□□□□ -0.48
USHBP1-203ENST00000431146 Q9UF83 564 aa12.05□□□□□ -0.48
USHBP1-203ENST00000431146 A8MWV9 139 aa12.05□□□□□ -0.48
USHBP1-203ENST00000431146 UFSP1Q6NVU6 142 aa12.05□□□□□ -0.48
USHBP1-203ENST00000431146 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
USHBP1-203ENST00000431146 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
USHBP1-203ENST00000431146 VCYO14598 125 aa12.04□□□□□ -0.48
USHBP1-203ENST00000431146 ATP5LO75964 103 aa12.04□□□□□ -0.48
USHBP1-203ENST00000431146 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
USHBP1-203ENST00000431146 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
USHBP1-203ENST00000431146 ZFP2Q6ZN57 461 aa12.04□□□□□ -0.48
USHBP1-203ENST00000431146 FBN1P35555 2871 aaKnown RBP12.03□□□□□ -0.48
USHBP1-203ENST00000431146 TRGV1A0A0A0MS02 117 aa12.03□□□□□ -0.48
USHBP1-203ENST00000431146 RPL32P62910 135 aaKnown RBP12.03□□□□□ -0.48
USHBP1-203ENST00000431146 C9orf66Q5T8R8 295 aa12.03□□□□□ -0.48
USHBP1-203ENST00000431146 KIR2DL4Q99706 377 aa12.03□□□□□ -0.48
USHBP1-203ENST00000431146 NBEAL2Q6ZNJ1 2754 aa12.03□□□□□ -0.48
USHBP1-203ENST00000431146 TRBV27A0A0K0K1C4 114 aa12.02□□□□□ -0.48
USHBP1-203ENST00000431146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.02□□□□□ -0.48
USHBP1-203ENST00000431146 K7EMI3 77 aa12.02□□□□□ -0.48
USHBP1-203ENST00000431146 RPL39P62891 51 aaKnown RBP12.02□□□□□ -0.48
USHBP1-203ENST00000431146 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.48
USHBP1-203ENST00000431146 GTSCR1Q86UQ5 136 aa12.02□□□□□ -0.48
USHBP1-203ENST00000431146 CSNK1G2-AS1Q8NCQ2 148 aa12.02□□□□□ -0.48
USHBP1-203ENST00000431146 IL17DQ8TAD2 202 aa12.02□□□□□ -0.49
USHBP1-203ENST00000431146 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.49
USHBP1-203ENST00000431146 INSL3P51460 131 aa12.01□□□□□ -0.49
USHBP1-203ENST00000431146 PIK3CD-AS1Q5SR53 167 aa12.01□□□□□ -0.49
USHBP1-203ENST00000431146 Q6ZTI0 123 aa12.01□□□□□ -0.49
USHBP1-203ENST00000431146 PTH2Q96A98 100 aa12.01□□□□□ -0.49
USHBP1-203ENST00000431146 TP53TG1Q9Y2A0 90 aa12.01□□□□□ -0.49
USHBP1-203ENST00000431146 TNFRSF18Q9Y5U5 241 aa12.01□□□□□ -0.49
USHBP1-203ENST00000431146 NOP10Q9NPE3 64 aaKnown RBP12.01□□□□□ -0.49
USHBP1-203ENST00000431146 MRPL35Q9NZE8 188 aaKnown RBP12□□□□□ -0.49
USHBP1-203ENST00000431146 H7C1H1 209 aa11.99□□□□□ -0.49
USHBP1-203ENST00000431146 RS1O15537 224 aa11.99□□□□□ -0.49
USHBP1-203ENST00000431146 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms