RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 I3L2K1 104 aa3.39□□□□□ -1.87
LRRK2-204ENST00000430804 IGLV1-51P01701 117 aa3.39□□□□□ -1.87
LRRK2-204ENST00000430804 PSMB8P28062 276 aa3.39□□□□□ -1.87
LRRK2-204ENST00000430804 OCC1Q8TAD7 63 aa3.39□□□□□ -1.87
LRRK2-204ENST00000430804 SPCS1Q9Y6A9 102 aa3.39□□□□□ -1.87
LRRK2-204ENST00000430804 NOTCH3Q9UM47 2321 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 A0A087X0K7 114 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 TMEM258P61165 79 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 PRR4Q16378 134 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 ANKRD39Q53RE8 183 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 OCIAD2Q56VL3 154 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 TMEM131Q92545 1883 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 K7EIM0 57 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 BRI3O95415 125 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 NCOR2Q9Y618 2525 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 SMIM27A0A1W2PRY6 76 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 NCR3O14931 201 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 LINC01545Q5VT33 79 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 BAALCQ8WXS3 180 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 RETNQ9HD89 108 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 GATA1P15976 413 aaPredicted RBP3.38□□□□□ -1.87
LRRK2-204ENST00000430804 ZNF524Q96C55 264 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 NUP210Q8TEM1 1887 aaPredicted RBP3.38□□□□□ -1.87
LRRK2-204ENST00000430804 EBI3Q14213 229 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 Q6ZSR3 168 aa3.38□□□□□ -1.87
LRRK2-204ENST00000430804 NLRC5Q86WI3 1866 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 LINC01556Q5JQF7 62 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 MALRD1Q5VYJ5 2156 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 ZFAND2AQ8N6M9 145 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 MYO18BQ8IUG5 2567 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 DOCK4Q8N1I0 1966 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 TRBV10-2A0A0K0K1G8 114 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 MUSTN1Q8IVN3 82 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 DOPEY1Q5JWR5 2465 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 FANCMQ8IYD8 2048 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 PRB4P10163 310 aaPredicted RBP3.37□□□□□ -1.87
LRRK2-204ENST00000430804 RPL37AP61513 92 aaKnown RBP3.37□□□□□ -1.87
LRRK2-204ENST00000430804 HSD52Q0P140 79 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 CIRBP-AS1Q8TBR5 109 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 CLUHP3Q96NS8 147 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 VSIRQ9H7M9 311 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 C9JAW5 83 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 Q6ZVH6 145 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 NAA38Q9BRA0 125 aaKnown RBP3.37□□□□□ -1.87
LRRK2-204ENST00000430804 C14orf132Q9NPU4 83 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 ABCA2Q9BZC7 2435 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 TMEM213A2RRL7 107 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 EPM2AB3EWF7 344 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 PROK1P58294 105 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 ATRAIDQ6UW56 229 aa3.37□□□□□ -1.87
LRRK2-204ENST00000430804 WDR81Q562E7 1941 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 TRBV6-8A0A0A6YYG3 113 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 CXCL1P09341 107 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 GUSBP1Q15486 140 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 KIF26BQ2KJY2 2108 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 Q6ZTC4 211 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 NUP35Q8NFH5 326 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 SERP1Q9Y6X1 66 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 LRRK2Q5S007 2527 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 SMKR1H3BMG3 65 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 SRP19P09132 144 aaKnown RBP3.36□□□□□ -1.87
LRRK2-204ENST00000430804 RNASE13Q5GAN3 156 aaKnown RBP3.36□□□□□ -1.87
LRRK2-204ENST00000430804 Q6ZSN1 163 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 HIVEP3Q5T1R4 2406 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 CSPG4Q6UVK1 2322 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 ZSWIM8A7E2V4 1837 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 IGLV9-49A0A0B4J1Y8 123 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 LINC00205P59089 165 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 MRPL35Q9NZE8 188 aaKnown RBP3.36□□□□□ -1.87
LRRK2-204ENST00000430804 J3QQQ9 107 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 UNQ9165/PRO28630Q6UXU0 137 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 LHFPL1Q86WI0 220 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 ADAMTS9Q9P2N4 1935 aa3.36□□□□□ -1.87
LRRK2-204ENST00000430804 ZNF462Q96JM2 2506 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 USP17L23D6RBM5 183 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 M0QXV9 152 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 BAALC-AS2P0C853 105 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 C10orf25Q5T742 122 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 DCANP1Q8TF63 244 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 C2orf48Q96LS8 159 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 CDIP1Q9H305 208 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 DOCK9Q9BZ29 2069 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 FREM1Q5H8C1 2179 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 PRAC2D3DTV9 90 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 M0R378 163 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 IGLV2-14P01704 120 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 JMJD7-PLA2G4BH0Y9G9 81 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 CD164L2Q6UWJ8 174 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 Q6ZVQ6 151 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 LINC00467Q9BRT7 94 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 ZNF580Q9UK33 172 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 SCN2AQ99250 2005 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 LST1O00453 97 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 SPRNQ5BIV9 151 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 ATOH7Q8N100 152 aa3.35□□□□□ -1.87
LRRK2-204ENST00000430804 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms